1 | # $Id$ |
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2 | |
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3 | PortSystem 1.0 |
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4 | |
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5 | name cufflinks |
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6 | version 0.9.1 |
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7 | categories science biology |
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8 | platforms darwin |
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9 | maintainers gmail.com:haroldpimentel |
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10 | license Boost |
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11 | description Cufflinks assembles transcripts, estimates their abundances,\ |
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12 | and tests for differential expression and regulation in RNA-Seq samples. |
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13 | long_description Cufflinks assembles transcripts, estimates their abundances, \ |
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14 | and tests for differential expression and regulation in RNA-Seq \ |
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15 | samples. It accepts aligned RNA-Seq reads and assembles the \ |
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16 | alignments into a parsimonious set of transcripts. \ |
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17 | Cufflinks then estimates the relative abundances of these \ |
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18 | transcripts based on how many reads support each one. |
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19 | homepage http://cufflinks.cbcb.umd.edu |
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20 | master_sites http://cufflinks.cbcb.umd.edu/downloads |
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21 | checksums md5 0191d0fb4449abb9f26bb4b89bed824e\ |
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22 | sha1 172398c87bd5fb55ccea1d545769990e94a17e1e\ |
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23 | rmd160 9933360dd3b8fb32072a11521ec6d8be2077970b |
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24 | depends_lib port:zlib \ |
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25 | port:samtools \ |
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26 | port:boost |
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27 | post-destroot { |
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28 | xinstall -d ${destroot}${prefix}/share/doc/${name} |
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29 | xinstall -m 644 -W ${worksrcpath} \ |
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30 | AUTHORS LICENSE README \ |
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31 | ${destroot}${prefix}/share/doc/${name} |
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32 | } |
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