Ticket #38724: main.2.log

File main.2.log, 15.2 KB (added by amicitas+macports@…, 12 years ago)

py27-scipy-main.log

Line 
1version:1
2:msg:main --->  Computing dependencies for py27-scipy:info:main .:debug:main py27-scipy has no conflicts
3:debug:main Searching for dependency: python27
4:debug:main Found Dependency: receipt exists for python27
5:debug:main Searching for dependency: py27-numpy
6:debug:main Found Dependency: receipt exists for py27-numpy
7:debug:main Searching for dependency: py27-nose
8:debug:main Found Dependency: receipt exists for py27-nose
9:debug:main Searching for dependency: SuiteSparse
10:debug:main Found Dependency: receipt exists for SuiteSparse
11:debug:main Searching for dependency: swig-python
12:debug:main Found Dependency: receipt exists for swig-python
13:debug:main Searching for dependency: gcc44
14:debug:main Found Dependency: receipt exists for gcc44
15:msg:main
16:debug:main Executing org.macports.main (py27-scipy)
17:debug:main changing euid/egid - current euid: 0 - current egid: 0
18:debug:main egid changed to: 502
19:debug:main euid changed to: 149941815
20:debug:archivefetch archivefetch phase started at Thu Apr 11 17:27:24 EDT 2013
21:msg:archivefetch --->  Fetching archive for py27-scipy
22:debug:archivefetch Executing org.macports.archivefetch (py27-scipy)
23:debug:archivefetch euid/egid changed to: 0/0
24:debug:archivefetch chowned /opt/local/var/macports/incoming to macports
25:debug:archivefetch euid/egid changed to: 149941815/502
26:info:archivefetch --->  py27-scipy-0.12.0_0+gcc44.darwin_10.x86_64.tbz2 doesn't seem to exist in /opt/local/var/macports/incoming/verified
27:msg:archivefetch --->  Attempting to fetch py27-scipy-0.12.0_0+gcc44.darwin_10.x86_64.tbz2 from http://packages.macports.org/py27-scipy
28:debug:archivefetch Fetching archive failed:: The requested URL returned error: 404
29:msg:archivefetch --->  Attempting to fetch py27-scipy-0.12.0_0+gcc44.darwin_10.x86_64.tbz2 from http://mse.uk.packages.macports.org/sites/packages.macports.org/py27-scipy
30:debug:archivefetch Fetching archive failed:: The requested URL returned error: 404
31:msg:archivefetch --->  Attempting to fetch py27-scipy-0.12.0_0+gcc44.darwin_10.x86_64.tbz2 from http://lil.fr.packages.macports.org/py27-scipy
32:debug:archivefetch Fetching archive failed:: The requested URL returned error: 404
33:debug:archivefetch Privilege de-escalation not attempted as not running as root.
34:debug:fetch fetch phase started at Thu Apr 11 17:27:25 EDT 2013
35:notice:fetch --->  Fetching distfiles for py27-scipy
36:debug:fetch Executing org.macports.fetch (py27-scipy)
37:debug:fetch Privilege de-escalation not attempted as not running as root.
38:debug:checksum checksum phase started at Thu Apr 11 17:27:26 EDT 2013
39:notice:checksum --->  Verifying checksum(s) for py27-scipy
40:debug:checksum Executing org.macports.checksum (py27-scipy)
41:info:checksum --->  Checksumming scipy-0.12.0.tar.gz
42:debug:checksum Correct (rmd160) checksum for scipy-0.12.0.tar.gz
43:debug:checksum Correct (sha256) checksum for scipy-0.12.0.tar.gz
44:debug:checksum Privilege de-escalation not attempted as not running as root.
45:debug:extract extract phase started at Thu Apr 11 17:27:26 EDT 2013
46:notice:extract --->  Extracting py27-scipy
47:debug:extract Executing org.macports.extract (py27-scipy)
48:info:extract --->  Extracting scipy-0.12.0.tar.gz
49:debug:extract setting option extract.args to '/opt/local/var/macports/distfiles/py-scipy/0.12.0_1/scipy-0.12.0.tar.gz'
50:debug:extract Environment: CPATH='/opt/local/include' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py-scipy/py27-scipy/work/.CC_PRINT_OPTIONS' LIBRARY_PATH='/opt/local/lib' CC_PRINT_OPTIONS='YES' MACOSX_DEPLOYMENT_TARGET='10.6'
51:debug:extract Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py-scipy/py27-scipy/work" && /usr/bin/gzip -dc '/opt/local/var/macports/distfiles/py-scipy/0.12.0_1/scipy-0.12.0.tar.gz' | /usr/bin/gnutar --no-same-owner -xf -'
52:debug:extract Executing command line:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py-scipy/py27-scipy/work" && /usr/bin/gzip -dc '/opt/local/var/macports/distfiles/py-scipy/0.12.0_1/scipy-0.12.0.tar.gz' | /usr/bin/gnutar --no-same-owner -xf -
53:debug:extract euid/egid changed to: 0/0
54:debug:extract chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py-scipy/py27-scipy/work to macports
55:debug:extract euid/egid changed to: 149941815/502
56:debug:extract Privilege de-escalation not attempted as not running as root.
57:debug:patch patch phase started at Thu Apr 11 17:28:00 EDT 2013
58:debug:patch Executing org.macports.patch (py27-scipy)
59:notice:patch --->  Applying patches to py27-scipy
60:info:patch --->  Applying umfpack_extra_libs.patch
61:debug:patch Environment: CPATH='/opt/local/include' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py-scipy/py27-scipy/work/.CC_PRINT_OPTIONS' LIBRARY_PATH='/opt/local/lib' CC_PRINT_OPTIONS='YES' MACOSX_DEPLOYMENT_TARGET='10.6'
62:debug:patch Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py-scipy/py27-scipy/work/scipy-0.12.0" && /usr/bin/patch -p0'
63:debug:patch Executing command line:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py-scipy/py27-scipy/work/scipy-0.12.0" && /usr/bin/patch -p0 < '/opt/local/var/macports/sources/rsync.macports.org/release/ports/python/py-scipy/files/umfpack_extra_libs.patch'
64:info:patch patching file site.cfg
65:debug:patch Executing proc-post-org.macports.patch-patch-0
66:debug:patch Executing reinplace: /usr/bin/sed s|@@MP_PREFIX@@|/opt/local|g < /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py-scipy/py27-scipy/work/scipy-0.12.0/site.cfg >@ file11
67:debug:patch euid/egid changed to: 0/0
68:debug:patch chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py-scipy/py27-scipy/work/scipy-0.12.0/site.cfg to macports
69:debug:patch euid/egid changed to: 149941815/502
70:debug:patch euid/egid changed to: 0/0
71:debug:patch setting attributes on /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py-scipy/py27-scipy/work/scipy-0.12.0/site.cfg
72:debug:patch euid/egid changed to: 149941815/502
73:debug:patch Executing reinplace: /usr/bin/sed s|vecLib|Accelerate|g < /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py-scipy/py27-scipy/work/scipy-0.12.0/scipy/lib/blas/fblaswrap_veclib_c.c.src >@ file11
74:debug:patch euid/egid changed to: 0/0
75:debug:patch chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py-scipy/py27-scipy/work/scipy-0.12.0/scipy/lib/blas/fblaswrap_veclib_c.c.src to macports
76:debug:patch euid/egid changed to: 149941815/502
77:debug:patch euid/egid changed to: 0/0
78:debug:patch setting attributes on /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py-scipy/py27-scipy/work/scipy-0.12.0/scipy/lib/blas/fblaswrap_veclib_c.c.src
79:debug:patch euid/egid changed to: 149941815/502
80:debug:patch Executing reinplace: /usr/bin/sed s|vecLib|Accelerate|g < /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py-scipy/py27-scipy/work/scipy-0.12.0/scipy/linalg/src/fblaswrap_veclib_c.c >@ file11
81:debug:patch euid/egid changed to: 0/0
82:debug:patch chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py-scipy/py27-scipy/work/scipy-0.12.0/scipy/linalg/src/fblaswrap_veclib_c.c to macports
83:debug:patch euid/egid changed to: 149941815/502
84:debug:patch euid/egid changed to: 0/0
85:debug:patch setting attributes on /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py-scipy/py27-scipy/work/scipy-0.12.0/scipy/linalg/src/fblaswrap_veclib_c.c
86:debug:patch euid/egid changed to: 149941815/502
87:debug:patch Executing reinplace: /usr/bin/sed s|vecLib|Accelerate|g < /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py-scipy/py27-scipy/work/scipy-0.12.0/scipy/sparse/linalg/eigen/arpack/ARPACK/FWRAPPERS/veclib_cabi_c.c >@ file11
88:debug:patch euid/egid changed to: 0/0
89:debug:patch chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py-scipy/py27-scipy/work/scipy-0.12.0/scipy/sparse/linalg/eigen/arpack/ARPACK/FWRAPPERS/veclib_cabi_c.c to macports
90:debug:patch euid/egid changed to: 149941815/502
91:debug:patch euid/egid changed to: 0/0
92:debug:patch setting attributes on /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py-scipy/py27-scipy/work/scipy-0.12.0/scipy/sparse/linalg/eigen/arpack/ARPACK/FWRAPPERS/veclib_cabi_c.c
93:debug:patch euid/egid changed to: 149941815/502
94:debug:patch Executing reinplace: /usr/bin/sed s|vecLib|Accelerate|g < /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py-scipy/py27-scipy/work/scipy-0.12.0/scipy/sparse/linalg/isolve/iterative/FWRAPPERS/veclib_cabi_c.c >@ file11
95:debug:patch euid/egid changed to: 0/0
96:debug:patch chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py-scipy/py27-scipy/work/scipy-0.12.0/scipy/sparse/linalg/isolve/iterative/FWRAPPERS/veclib_cabi_c.c to macports
97:debug:patch euid/egid changed to: 149941815/502
98:debug:patch euid/egid changed to: 0/0
99:debug:patch setting attributes on /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py-scipy/py27-scipy/work/scipy-0.12.0/scipy/sparse/linalg/isolve/iterative/FWRAPPERS/veclib_cabi_c.c
100:debug:patch euid/egid changed to: 149941815/502
101:debug:patch Privilege de-escalation not attempted as not running as root.
102:debug:configure configure phase started at Thu Apr 11 17:28:01 EDT 2013
103:notice:configure --->  Configuring py27-scipy
104:debug:configure Using compiler 'MacPorts gcc 4.4'
105:debug:configure Executing org.macports.configure (py27-scipy)
106:debug:configure Privilege de-escalation not attempted as not running as root.
107:debug:build build phase started at Thu Apr 11 17:28:01 EDT 2013
108:notice:build --->  Building py27-scipy
109:debug:build Executing proc-pre-org.macports.build-build-0
110:debug:build Executing org.macports.build (py27-scipy)
111:debug:build Environment: CPATH='/opt/local/include' MACOSX_DEPLOYMENT_TARGET='10.6' LIBRARY_PATH='/opt/local/lib' CCFLAGS='-I/opt/local/include -L/opt/local/lib' CXX='/opt/local/bin/g++-mp-4.4' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py-scipy/py27-scipy/work/.CC_PRINT_OPTIONS' OBJC='/opt/local/bin/gcc-mp-4.4' F90='/opt/local/bin/gfortran-mp-4.4' FC='/opt/local/bin/gfortran-mp-4.4' F77='/opt/local/bin/gfortran-mp-4.4' CC_PRINT_OPTIONS='YES' CC='/opt/local/bin/gcc-mp-4.4'
112:debug:build Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py-scipy/py27-scipy/work/scipy-0.12.0" && /opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7 setup.py --no-user-cfg config_fc --fcompiler gnu95 --f77exec /opt/local/bin/gfortran-mp-4.4 --f90exec /opt/local/bin/gfortran-mp-4.4 config --cc /opt/local/bin/gcc-mp-4.4 --include-dirs /opt/local/include --library-dirs /opt/local/lib build'
113:debug:build Executing command line:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py-scipy/py27-scipy/work/scipy-0.12.0" && /opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7 setup.py --no-user-cfg config_fc --fcompiler gnu95 --f77exec /opt/local/bin/gfortran-mp-4.4 --f90exec /opt/local/bin/gfortran-mp-4.4 config --cc /opt/local/bin/gcc-mp-4.4 --include-dirs /opt/local/include --library-dirs /opt/local/lib build
114:info:build Traceback (most recent call last):
115:info:build   File "setup.py", line 165, in <module>
116:info:build     setup_package()
117:info:build   File "setup.py", line 145, in setup_package
118:info:build     from numpy.distutils.core import setup
119:info:build   File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/__init__.py", line 137, in <module>
120:info:build     import add_newdocs
121:info:build   File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/add_newdocs.py", line 9, in <module>
122:info:build     from numpy.lib import add_newdoc
123:info:build   File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/lib/__init__.py", line 13, in <module>
124:info:build     from polynomial import *
125:info:build   File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/lib/polynomial.py", line 17, in <module>
126:info:build     from numpy.linalg import eigvals, lstsq, inv
127:info:build   File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/linalg/__init__.py", line 48, in <module>
128:info:build     from linalg import *
129:info:build   File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/linalg/linalg.py", line 23, in <module>
130:info:build     from numpy.linalg import lapack_lite
131:info:build ImportError: dlopen(/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/linalg/lapack_lite.so, 2): Symbol not found: _omp_get_num_threads
132:info:build   Referenced from: /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/linalg/lapack_lite.so
133:info:build   Expected in: flat namespace
134:info:build  in /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/linalg/lapack_lite.so
135:info:build Command failed:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py-scipy/py27-scipy/work/scipy-0.12.0" && /opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7 setup.py --no-user-cfg config_fc --fcompiler gnu95 --f77exec /opt/local/bin/gfortran-mp-4.4 --f90exec /opt/local/bin/gfortran-mp-4.4 config --cc /opt/local/bin/gcc-mp-4.4 --include-dirs /opt/local/include --library-dirs /opt/local/lib build
136:info:build Exit code: 1
137:error:build org.macports.build for port py27-scipy returned: command execution failed
138:debug:build Error code: CHILDSTATUS 34548 1
139:debug:build Backtrace: command execution failed
140    while executing
141"system -nice 0 $fullcmdstring"
142    ("eval" body line 1)
143    invoked from within
144"eval system $notty $nice \$fullcmdstring"
145    invoked from within
146"command_exec build"
147    (procedure "portbuild::build_main" line 8)
148    invoked from within
149"$procedure $targetname"
150:info:build Warning: targets not executed for py27-scipy: org.macports.install org.macports.build org.macports.destroot
151:notice:build Please see the log file for port py27-scipy for details:
152    /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py-scipy/py27-scipy/main.log