Ticket #38724: py27-scipy-main.log

File py27-scipy-main.log, 7.0 KB (added by watsodw, 12 years ago)
Line 
1version:1
2:msg:main --->  Computing dependencies for py27-scipy:info:main .:debug:main py27-scipy has no conflicts
3:debug:main Searching for dependency: python27
4:debug:main Found Dependency: receipt exists for python27
5:debug:main Searching for dependency: py27-numpy
6:debug:main Found Dependency: receipt exists for py27-numpy
7:debug:main Searching for dependency: py27-nose
8:debug:main Found Dependency: receipt exists for py27-nose
9:debug:main Searching for dependency: SuiteSparse
10:debug:main Found Dependency: receipt exists for SuiteSparse
11:debug:main Searching for dependency: swig-python
12:debug:main Found Dependency: receipt exists for swig-python
13:debug:main Searching for dependency: atlas
14:debug:main Found Dependency: receipt exists for atlas
15:debug:main Searching for dependency: gcc44
16:debug:main Found Dependency: receipt exists for gcc44
17:msg:main
18:debug:main Executing org.macports.main (py27-scipy)
19:debug:main changing euid/egid - current euid: 0 - current egid: 0
20:debug:main egid changed to: 504
21:debug:main euid changed to: 63920313
22:debug:main Skipping completed org.macports.archivefetch (py27-scipy)
23:debug:main Privilege de-escalation not attempted as not running as root.
24:debug:main Skipping completed org.macports.fetch (py27-scipy)
25:debug:main Privilege de-escalation not attempted as not running as root.
26:debug:main Skipping completed org.macports.checksum (py27-scipy)
27:debug:main Privilege de-escalation not attempted as not running as root.
28:debug:main Skipping completed org.macports.extract (py27-scipy)
29:debug:main Privilege de-escalation not attempted as not running as root.
30:debug:main Skipping completed org.macports.patch (py27-scipy)
31:debug:main Privilege de-escalation not attempted as not running as root.
32:debug:main Skipping completed org.macports.configure (py27-scipy)
33:debug:main Privilege de-escalation not attempted as not running as root.
34:debug:build build phase started at Mon Apr  8 15:19:26 CDT 2013
35:notice:build --->  Building py27-scipy
36:debug:build Executing proc-pre-org.macports.build-build-0
37:debug:build Executing org.macports.build (py27-scipy)
38:debug:build Environment: CPATH='/opt/macports/include' LIBRARY_PATH='/opt/macports/lib' MACOSX_DEPLOYMENT_TARGET='10.6' CCFLAGS='-I/opt/macports/include -L/opt/macports/lib' CXX='/opt/macports/bin/g++-mp-4.4' CC_PRINT_OPTIONS_FILE='/opt/macports/var/macports/build/_opt_macports_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-scipy/py27-scipy/work/.CC_PRINT_OPTIONS' LAPACK='/opt/macports/lib' OBJC='/opt/macports/bin/gcc-mp-4.4' F90='/opt/macports/bin/gfortran-mp-4.4' FC='/opt/macports/bin/gfortran-mp-4.4' BLAS='/opt/macports/lib' F77='/opt/macports/bin/gfortran-mp-4.4' ATLAS='/opt/macports/lib' CC_PRINT_OPTIONS='YES' CC='/opt/macports/bin/gcc-mp-4.4'
39:debug:build Assembled command: 'cd "/opt/macports/var/macports/build/_opt_macports_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-scipy/py27-scipy/work/scipy-0.12.0" && /opt/macports/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7 setup.py --no-user-cfg config_fc --fcompiler gnu95 --f77exec /opt/macports/bin/gfortran-mp-4.4 --f90exec /opt/macports/bin/gfortran-mp-4.4 config --cc /opt/macports/bin/gcc-mp-4.4 --include-dirs /opt/macports/include --library-dirs /opt/macports/lib build'
40:debug:build Executing command line:  cd "/opt/macports/var/macports/build/_opt_macports_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-scipy/py27-scipy/work/scipy-0.12.0" && /opt/macports/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7 setup.py --no-user-cfg config_fc --fcompiler gnu95 --f77exec /opt/macports/bin/gfortran-mp-4.4 --f90exec /opt/macports/bin/gfortran-mp-4.4 config --cc /opt/macports/bin/gcc-mp-4.4 --include-dirs /opt/macports/include --library-dirs /opt/macports/lib build
41:info:build Traceback (most recent call last):
42:info:build   File "setup.py", line 165, in <module>
43:info:build     setup_package()
44:info:build   File "setup.py", line 145, in setup_package
45:info:build     from numpy.distutils.core import setup
46:info:build   File "/opt/macports/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/__init__.py", line 137, in <module>
47:info:build     import add_newdocs
48:info:build   File "/opt/macports/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/add_newdocs.py", line 9, in <module>
49:info:build     from numpy.lib import add_newdoc
50:info:build   File "/opt/macports/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/lib/__init__.py", line 13, in <module>
51:info:build     from polynomial import *
52:info:build   File "/opt/macports/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/lib/polynomial.py", line 17, in <module>
53:info:build     from numpy.linalg import eigvals, lstsq, inv
54:info:build   File "/opt/macports/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/linalg/__init__.py", line 48, in <module>
55:info:build     from linalg import *
56:info:build   File "/opt/macports/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/linalg/linalg.py", line 23, in <module>
57:info:build     from numpy.linalg import lapack_lite
58:info:build ImportError: dlopen(/opt/macports/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/linalg/lapack_lite.so, 2): Symbol not found: _omp_get_num_threads
59:info:build   Referenced from: /opt/macports/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/linalg/lapack_lite.so
60:info:build   Expected in: flat namespace
61:info:build  in /opt/macports/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/linalg/lapack_lite.so
62:info:build Command failed:  cd "/opt/macports/var/macports/build/_opt_macports_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-scipy/py27-scipy/work/scipy-0.12.0" && /opt/macports/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7 setup.py --no-user-cfg config_fc --fcompiler gnu95 --f77exec /opt/macports/bin/gfortran-mp-4.4 --f90exec /opt/macports/bin/gfortran-mp-4.4 config --cc /opt/macports/bin/gcc-mp-4.4 --include-dirs /opt/macports/include --library-dirs /opt/macports/lib build
63:info:build Exit code: 1
64:error:build org.macports.build for port py27-scipy returned: command execution failed
65:debug:build Error code: CHILDSTATUS 48397 1
66:debug:build Backtrace: command execution failed
67    while executing
68"system -nice 0 $fullcmdstring"
69    ("eval" body line 1)
70    invoked from within
71"eval system $notty $nice \$fullcmdstring"
72    invoked from within
73"command_exec build"
74    (procedure "portbuild::build_main" line 8)
75    invoked from within
76"$procedure $targetname"
77:info:build Warning: targets not executed for py27-scipy: org.macports.install org.macports.build org.macports.destroot
78:notice:build Please see the log file for port py27-scipy for details:
79    /opt/macports/var/macports/logs/_opt_macports_var_macports_sources_rsync.macports.org_release_tarballs_ports_python_py-scipy/py27-scipy/main.log