2 | | |
3 | | ------ |
4 | | version:1 |
5 | | :debug:main epoch: in tree: 0 installed: 0 |
6 | | :debug:main zlib 1.2.7_0 exists in the ports tree |
7 | | :debug:main zlib 1.2.7_0 is the latest installed |
8 | | :debug:main zlib 1.2.7_0 is active |
9 | | :debug:main Merging existing variants '' into variants |
10 | | :debug:main new fully merged portvariants: |
11 | | :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/archivers/zlib |
12 | | :debug:main OS darwin/12.3.0 (Mac OS X 10.8) arch i386 |
13 | | :debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided |
14 | | :debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided |
15 | | :debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided |
16 | | :debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/xcodeversion-1.0.tcl |
17 | | :debug:main adding the default universal variant |
18 | | :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf |
19 | | :debug:main No need to upgrade! zlib 1.2.7_0 >= zlib 1.2.7_0 |
20 | | :debug:main epoch: in tree: 0 installed: 0 |
21 | | :debug:main samtools 0.1.18_0 exists in the ports tree |
22 | | :debug:main samtools 0.1.18_0 is the latest installed |
23 | | :debug:main samtools 0.1.18_0 is active |
24 | | :debug:main Merging existing variants '' into variants |
25 | | :debug:main new fully merged portvariants: |
26 | | :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/science/samtools |
27 | | :debug:main OS darwin/12.3.0 (Mac OS X 10.8) arch i386 |
28 | | :debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided |
29 | | :debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided |
30 | | :debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided |
31 | | :debug:main universal_variant is false, so not adding the default universal variant |
32 | | :debug:main No need to upgrade! samtools 0.1.18_0 >= samtools 0.1.18_0 |
33 | | :debug:main epoch: in tree: 0 installed: 0 |
34 | | :debug:main ncurses 5.9_2 exists in the ports tree |
35 | | :debug:main ncurses 5.9_2 is the latest installed |
36 | | :debug:main ncurses 5.9_2 is active |
37 | | :debug:main Merging existing variants '' into variants |
38 | | :debug:main new fully merged portvariants: |
39 | | :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/ncurses |
40 | | :debug:main OS darwin/12.3.0 (Mac OS X 10.8) arch i386 |
41 | | :debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided |
42 | | :debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided |
43 | | :debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided |
44 | | :debug:main adding the default universal variant |
45 | | :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf |
46 | | :debug:main No need to upgrade! ncurses 5.9_2 >= ncurses 5.9_2 |
47 | | :debug:main epoch: in tree: 0 installed: 0 |
48 | | :debug:main boost 1.53.0_1 exists in the ports tree |
49 | | :debug:main boost 1.53.0_1 +no_single+no_static+python27 is the latest installed |
50 | | :debug:main boost 1.53.0_1 +no_single+no_static+python27 is active |
51 | | :debug:main Merging existing variants '+no_single+no_static+python27' into variants |
52 | | :debug:main new fully merged portvariants: no_static + no_single + python27 + |
53 | | :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/boost |
54 | | :debug:main OS darwin/12.3.0 (Mac OS X 10.8) arch i386 |
55 | | :debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided |
56 | | :debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided |
57 | | :debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided |
58 | | :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf |
59 | | :debug:main universal variant already exists, so not adding the default one |
60 | | :debug:main Executing variant python27 provides python27 |
61 | | :debug:main Executing variant no_static provides no_static |
62 | | :debug:main Executing variant no_single provides no_single |
63 | | :debug:main No need to upgrade! boost 1.53.0_1 >= boost 1.53.0_1 |
64 | | :debug:main epoch: in tree: 0 installed: 0 |
65 | | :debug:main expat 2.1.0_0 exists in the ports tree |
66 | | :debug:main expat 2.1.0_0 is the latest installed |
67 | | :debug:main expat 2.1.0_0 is active |
68 | | :debug:main Merging existing variants '' into variants |
69 | | :debug:main new fully merged portvariants: |
70 | | :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/textproc/expat |
71 | | :debug:main OS darwin/12.3.0 (Mac OS X 10.8) arch i386 |
72 | | :debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided |
73 | | :debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided |
74 | | :debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided |
75 | | :debug:main adding the default universal variant |
76 | | :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf |
77 | | :debug:main No need to upgrade! expat 2.1.0_0 >= expat 2.1.0_0 |
78 | | :debug:main epoch: in tree: 0 installed: 0 |
79 | | :debug:main bzip2 1.0.6_0 exists in the ports tree |
80 | | :debug:main bzip2 1.0.6_0 is the latest installed |
81 | | :debug:main bzip2 1.0.6_0 is active |
82 | | :debug:main Merging existing variants '' into variants |
83 | | :debug:main new fully merged portvariants: |
84 | | :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/archivers/bzip2 |
85 | | :debug:main OS darwin/12.3.0 (Mac OS X 10.8) arch i386 |
86 | | :debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided |
87 | | :debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided |
88 | | :debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided |
89 | | :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf |
90 | | :debug:main universal variant already exists, so not adding the default one |
91 | | :debug:main No need to upgrade! bzip2 1.0.6_0 >= bzip2 1.0.6_0 |
92 | | :debug:main epoch: in tree: 0 installed: 0 |
93 | | :debug:main libiconv 1.14_0 exists in the ports tree |
94 | | :debug:main libiconv 1.14_0 is the latest installed |
95 | | :debug:main libiconv 1.14_0 is active |
96 | | :debug:main Merging existing variants '' into variants |
97 | | :debug:main new fully merged portvariants: |
98 | | :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/textproc/libiconv |
99 | | :debug:main OS darwin/12.3.0 (Mac OS X 10.8) arch i386 |
100 | | :debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided |
101 | | :debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided |
102 | | :debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided |
103 | | :debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl |
104 | | :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf |
105 | | :debug:main universal variant already exists, so not adding the default one |
106 | | :debug:main No need to upgrade! libiconv 1.14_0 >= libiconv 1.14_0 |
107 | | :debug:main epoch: in tree: 0 installed: 0 |
108 | | :debug:main icu 49.1.2_1 exists in the ports tree |
109 | | :debug:main icu 49.1.2_1 is the latest installed |
110 | | :debug:main icu 49.1.2_1 is active |
111 | | :debug:main Merging existing variants '' into variants |
112 | | :debug:main new fully merged portvariants: |
113 | | :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/icu |
114 | | :debug:main OS darwin/12.3.0 (Mac OS X 10.8) arch i386 |
115 | | :debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided |
116 | | :debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided |
117 | | :debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided |
118 | | :debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl |
119 | | :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf |
120 | | :debug:main universal variant already exists, so not adding the default one |
121 | | :debug:main No need to upgrade! icu 49.1.2_1 >= icu 49.1.2_1 |
122 | | :debug:main epoch: in tree: 2 installed: 2 |
123 | | :debug:main python27 2.7.3_1 exists in the ports tree |
124 | | :debug:main python27 2.7.3_1 is the latest installed |
125 | | :debug:main python27 2.7.3_1 is active |
126 | | :debug:main Merging existing variants '' into variants |
127 | | :debug:main new fully merged portvariants: |
128 | | :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/lang/python27 |
129 | | :debug:main OS darwin/12.3.0 (Mac OS X 10.8) arch i386 |
130 | | :debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided |
131 | | :debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided |
132 | | :debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided |
133 | | :debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl |
134 | | :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf |
135 | | :debug:main universal variant already exists, so not adding the default one |
136 | | :debug:main No need to upgrade! python27 2.7.3_1 >= python27 2.7.3_1 |
137 | | :debug:main epoch: in tree: 0 installed: 0 |
138 | | :debug:main gettext 0.18.2.1_0 exists in the ports tree |
139 | | :debug:main gettext 0.18.2.1_0 is the latest installed |
140 | | :debug:main gettext 0.18.2.1_0 is active |
141 | | :debug:main Merging existing variants '' into variants |
142 | | :debug:main new fully merged portvariants: |
143 | | :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/gettext |
144 | | :debug:main OS darwin/12.3.0 (Mac OS X 10.8) arch i386 |
145 | | :debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided |
146 | | :debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided |
147 | | :debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided |
148 | | :debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl |
149 | | :debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl |
150 | | :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf |
151 | | :debug:main compiler clang 425.0.24 not blacklisted because does not match {clang < 211.10.1} |
152 | | :debug:main universal variant already exists, so not adding the default one |
153 | | :debug:main No need to upgrade! gettext 0.18.2.1_0 >= gettext 0.18.2.1_0 |
154 | | :debug:main epoch: in tree: 1 installed: 1 |
155 | | :debug:main openssl 1.0.1e_1 exists in the ports tree |
156 | | :debug:main openssl 1.0.1e_1 is the latest installed |
157 | | :debug:main openssl 1.0.1e_1 is active |
158 | | :debug:main Merging existing variants '' into variants |
159 | | :debug:main new fully merged portvariants: |
160 | | :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/openssl |
161 | | :debug:main OS darwin/12.3.0 (Mac OS X 10.8) arch i386 |
162 | | :debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided |
163 | | :debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided |
164 | | :debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided |
165 | | :debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl |
166 | | :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf |
167 | | :debug:main universal variant already exists, so not adding the default one |
168 | | :debug:main No need to upgrade! openssl 1.0.1e_1 >= openssl 1.0.1e_1 |
169 | | :debug:main epoch: in tree: 0 installed: 0 |
170 | | :debug:main sqlite3 3.7.16_0 exists in the ports tree |
171 | | :debug:main sqlite3 3.7.16_0 is the latest installed |
172 | | :debug:main sqlite3 3.7.16_0 is active |
173 | | :debug:main Merging existing variants '' into variants |
174 | | :debug:main new fully merged portvariants: |
175 | | :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/databases/sqlite3 |
176 | | :debug:main OS darwin/12.3.0 (Mac OS X 10.8) arch i386 |
177 | | :debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided |
178 | | :debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided |
179 | | :debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided |
180 | | :debug:main adding the default universal variant |
181 | | :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf |
182 | | :debug:main No need to upgrade! sqlite3 3.7.16_0 >= sqlite3 3.7.16_0 |
183 | | :debug:main epoch: in tree: 20090923 installed: 20090923 |
184 | | :debug:main libedit 20121213-3.0_0 exists in the ports tree |
185 | | :debug:main libedit 20121213-3.0_0 is the latest installed |
186 | | :debug:main libedit 20121213-3.0_0 is active |
187 | | :debug:main Merging existing variants '' into variants |
188 | | :debug:main new fully merged portvariants: |
189 | | :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/libedit |
190 | | :debug:main OS darwin/12.3.0 (Mac OS X 10.8) arch i386 |
191 | | :debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided |
192 | | :debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided |
193 | | :debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided |
194 | | :debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl |
195 | | :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf |
196 | | :debug:main universal variant already exists, so not adding the default one |
197 | | :debug:main No need to upgrade! libedit 20121213-3.0_0 >= libedit 20121213-3.0_0 |
198 | | :debug:main epoch: in tree: 0 installed: 0 |
199 | | :debug:main db46 4.6.21_7 exists in the ports tree |
200 | | :debug:main db46 4.6.21_7 is the latest installed |
201 | | :debug:main db46 4.6.21_7 is active |
202 | | :debug:main Merging existing variants '' into variants |
203 | | :debug:main new fully merged portvariants: |
204 | | :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/databases/db46 |
205 | | :debug:main OS darwin/12.3.0 (Mac OS X 10.8) arch i386 |
206 | | :debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided |
207 | | :debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided |
208 | | :debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided |
209 | | :debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl |
210 | | :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf |
211 | | :debug:main universal variant already exists, so not adding the default one |
212 | | :debug:main No need to upgrade! db46 4.6.21_7 >= db46 4.6.21_7 |
213 | | :debug:main epoch: in tree: 0 installed: 0 |
214 | | :debug:main python_select 0.3_2 exists in the ports tree |
215 | | :debug:main python_select 0.3_2 is the latest installed |
216 | | :debug:main python_select 0.3_2 is active |
217 | | :debug:main Merging existing variants '' into variants |
218 | | :debug:main new fully merged portvariants: |
219 | | :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/sysutils/python_select |
220 | | :debug:main OS darwin/12.3.0 (Mac OS X 10.8) arch i386 |
221 | | :debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided |
222 | | :debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided |
223 | | :debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided |
224 | | :debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl |
225 | | :debug:main universal_variant is false, so not adding the default universal variant |
226 | | :debug:main No need to upgrade! python_select 0.3_2 >= python_select 0.3_2 |
227 | | :msg:main ---> Computing dependencies for cufflinks:info:main .:debug:main cufflinks has no conflicts |
228 | | :debug:main Searching for dependency: zlib |
229 | | :debug:main Found Dependency: receipt exists for zlib |
230 | | :debug:main Searching for dependency: samtools |
231 | | :debug:main Found Dependency: receipt exists for samtools |
232 | | :debug:main Searching for dependency: boost |
233 | | :debug:main Found Dependency: receipt exists for boost |
234 | | :msg:main |
235 | | :debug:main Executing org.macports.main (cufflinks) |
236 | | :debug:main changing euid/egid - current euid: 0 - current egid: 0 |
237 | | :debug:main egid changed to: 501 |
238 | | :debug:main euid changed to: 503 |
239 | | :debug:main Skipping completed org.macports.archivefetch (cufflinks) |
240 | | :debug:main Privilege de-escalation not attempted as not running as root. |
241 | | :debug:main Skipping completed org.macports.fetch (cufflinks) |
242 | | :debug:main Privilege de-escalation not attempted as not running as root. |
243 | | :debug:main Skipping completed org.macports.checksum (cufflinks) |
244 | | :debug:main Privilege de-escalation not attempted as not running as root. |
245 | | :debug:main Skipping completed org.macports.extract (cufflinks) |
246 | | :debug:main Privilege de-escalation not attempted as not running as root. |
247 | | :debug:main Skipping completed org.macports.patch (cufflinks) |
248 | | :debug:main Privilege de-escalation not attempted as not running as root. |
249 | | :debug:main Skipping completed org.macports.configure (cufflinks) |
250 | | :debug:main Privilege de-escalation not attempted as not running as root. |
251 | | :debug:build build phase started at Mon Apr 22 08:16:49 EDT 2013 |
252 | | :notice:build ---> Building cufflinks |
253 | | :debug:build Executing org.macports.build (cufflinks) |
254 | | :debug:build Environment: CPATH='/opt/local/include' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_cufflinks/cufflinks/work/.CC_PRINT_OPTIONS' LIBRARY_PATH='/opt/local/lib' CC_PRINT_OPTIONS='YES' MACOSX_DEPLOYMENT_TARGET='10.8' |
255 | | :debug:build Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_cufflinks/cufflinks/work/cufflinks-0.9.3" && /usr/bin/make -j24 -w all' |
256 | | :debug:build Executing command line: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_cufflinks/cufflinks/work/cufflinks-0.9.3" && /usr/bin/make -j24 -w all |
257 | | :info:build make: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_cufflinks/cufflinks/work/cufflinks-0.9.3' |
258 | | :info:build /usr/bin/make all-recursive |
259 | | :info:build make[1]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_cufflinks/cufflinks/work/cufflinks-0.9.3' |
260 | | :info:build Making all in src |
261 | | :info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_cufflinks/cufflinks/work/cufflinks-0.9.3/src' |
262 | | :info:build if /usr/bin/clang++ -DHAVE_CONFIG_H -I. -I. -I.. -I../src -I/opt/local/include -I/usr/include -Wall -Wno-strict-aliasing -g -gdwarf-2 -Wuninitialized -arch x86_64 -O3 -pipe -O2 -arch x86_64 -DNDEBUG -pthread -I/opt/local/include -I/opt/local/include -MT clustering.o -MD -MP -MF ".deps/clustering.Tpo" -c -o clustering.o clustering.cpp; \ |
263 | | :info:build then mv -f ".deps/clustering.Tpo" ".deps/clustering.Po"; else rm -f ".deps/clustering.Tpo"; exit 1; fi |
264 | | :info:build if /usr/bin/clang++ -DHAVE_CONFIG_H -I. -I. -I.. -I../src -I/opt/local/include -I/usr/include -Wall -Wno-strict-aliasing -g -gdwarf-2 -Wuninitialized -arch x86_64 -O3 -pipe -O2 -arch x86_64 -DNDEBUG -pthread -I/opt/local/include -I/opt/local/include -MT differential.o -MD -MP -MF ".deps/differential.Tpo" -c -o differential.o differential.cpp; \ |
265 | | :info:build then mv -f ".deps/differential.Tpo" ".deps/differential.Po"; else rm -f ".deps/differential.Tpo"; exit 1; fi |
266 | | :info:build if /usr/bin/clang++ -DHAVE_CONFIG_H -I. -I. -I.. -I../src -I/opt/local/include -I/usr/include -Wall -Wno-strict-aliasing -g -gdwarf-2 -Wuninitialized -arch x86_64 -O3 -pipe -O2 -arch x86_64 -DNDEBUG -pthread -I/opt/local/include -I/opt/local/include -MT common.o -MD -MP -MF ".deps/common.Tpo" -c -o common.o common.cpp; \ |
267 | | :info:build then mv -f ".deps/common.Tpo" ".deps/common.Po"; else rm -f ".deps/common.Tpo"; exit 1; fi |
268 | | :info:build if /usr/bin/clang++ -DHAVE_CONFIG_H -I. -I. -I.. -I../src -I/opt/local/include -I/usr/include -Wall -Wno-strict-aliasing -g -gdwarf-2 -Wuninitialized -arch x86_64 -O3 -pipe -O2 -arch x86_64 -DNDEBUG -pthread -I/opt/local/include -I/opt/local/include -MT assemble.o -MD -MP -MF ".deps/assemble.Tpo" -c -o assemble.o assemble.cpp; \ |
269 | | :info:build then mv -f ".deps/assemble.Tpo" ".deps/assemble.Po"; else rm -f ".deps/assemble.Tpo"; exit 1; fi |
270 | | :info:build if /usr/bin/clang++ -DHAVE_CONFIG_H -I. -I. -I.. -I../src -I/opt/local/include -I/usr/include -Wall -Wno-strict-aliasing -g -gdwarf-2 -Wuninitialized -arch x86_64 -O3 -pipe -O2 -arch x86_64 -DNDEBUG -pthread -I/opt/local/include -I/opt/local/include -MT abundances.o -MD -MP -MF ".deps/abundances.Tpo" -c -o abundances.o abundances.cpp; \ |
271 | | :info:build then mv -f ".deps/abundances.Tpo" ".deps/abundances.Po"; else rm -f ".deps/abundances.Tpo"; exit 1; fi |
272 | | :info:build if /usr/bin/clang++ -DHAVE_CONFIG_H -I. -I. -I.. -I../src -I/opt/local/include -I/usr/include -Wall -Wno-strict-aliasing -g -gdwarf-2 -Wuninitialized -arch x86_64 -O3 -pipe -O2 -arch x86_64 -DNDEBUG -pthread -I/opt/local/include -I/opt/local/include -MT scaffolds.o -MD -MP -MF ".deps/scaffolds.Tpo" -c -o scaffolds.o scaffolds.cpp; \ |
273 | | :info:build then mv -f ".deps/scaffolds.Tpo" ".deps/scaffolds.Po"; else rm -f ".deps/scaffolds.Tpo"; exit 1; fi |
274 | | :info:build if /usr/bin/clang++ -DHAVE_CONFIG_H -I. -I. -I.. -I../src -I/opt/local/include -I/usr/include -Wall -Wno-strict-aliasing -g -gdwarf-2 -Wuninitialized -arch x86_64 -O3 -pipe -O2 -arch x86_64 -DNDEBUG -pthread -I/opt/local/include -I/opt/local/include -MT hits.o -MD -MP -MF ".deps/hits.Tpo" -c -o hits.o hits.cpp; \ |
275 | | :info:build then mv -f ".deps/hits.Tpo" ".deps/hits.Po"; else rm -f ".deps/hits.Tpo"; exit 1; fi |
276 | | :info:build if /usr/bin/clang++ -DHAVE_CONFIG_H -I. -I. -I.. -I../src -I/opt/local/include -I/usr/include -Wall -Wno-strict-aliasing -g -gdwarf-2 -Wuninitialized -arch x86_64 -O3 -pipe -O2 -arch x86_64 -DNDEBUG -pthread -I/opt/local/include -I/opt/local/include -MT genes.o -MD -MP -MF ".deps/genes.Tpo" -c -o genes.o genes.cpp; \ |
277 | | :info:build then mv -f ".deps/genes.Tpo" ".deps/genes.Po"; else rm -f ".deps/genes.Tpo"; exit 1; fi |
278 | | :info:build if /usr/bin/clang++ -DHAVE_CONFIG_H -I. -I. -I.. -I../src -I/opt/local/include -I/usr/include -Wall -Wno-strict-aliasing -g -gdwarf-2 -Wuninitialized -arch x86_64 -O3 -pipe -O2 -arch x86_64 -DNDEBUG -pthread -I/opt/local/include -I/opt/local/include -MT bundles.o -MD -MP -MF ".deps/bundles.Tpo" -c -o bundles.o bundles.cpp; \ |
279 | | :info:build then mv -f ".deps/bundles.Tpo" ".deps/bundles.Po"; else rm -f ".deps/bundles.Tpo"; exit 1; fi |
280 | | :info:build if /usr/bin/clang++ -DHAVE_CONFIG_H -I. -I. -I.. -I../src -I/opt/local/include -I/usr/include -Wall -Wno-strict-aliasing -g -gdwarf-2 -Wuninitialized -arch x86_64 -O3 -pipe -O2 -arch x86_64 -DNDEBUG -pthread -I/opt/local/include -I/opt/local/include -MT filters.o -MD -MP -MF ".deps/filters.Tpo" -c -o filters.o filters.cpp; \ |
281 | | :info:build then mv -f ".deps/filters.Tpo" ".deps/filters.Po"; else rm -f ".deps/filters.Tpo"; exit 1; fi |
282 | | :info:build if /usr/bin/clang++ -DHAVE_CONFIG_H -I. -I. -I.. -I../src -I/opt/local/include -I/usr/include -Wall -Wno-strict-aliasing -g -gdwarf-2 -Wuninitialized -arch x86_64 -O3 -pipe -O2 -arch x86_64 -DNDEBUG -pthread -I/opt/local/include -I/opt/local/include -MT scaffold_graph.o -MD -MP -MF ".deps/scaffold_graph.Tpo" -c -o scaffold_graph.o scaffold_graph.cpp; \ |
283 | | :info:build then mv -f ".deps/scaffold_graph.Tpo" ".deps/scaffold_graph.Po"; else rm -f ".deps/scaffold_graph.Tpo"; exit 1; fi |
284 | | :info:build if /usr/bin/clang++ -DHAVE_CONFIG_H -I. -I. -I.. -I../src -I/opt/local/include -I/usr/include -Wall -Wno-strict-aliasing -g -gdwarf-2 -Wuninitialized -arch x86_64 -O3 -pipe -O2 -arch x86_64 -DNDEBUG -pthread -I/opt/local/include -I/opt/local/include -MT matching_merge.o -MD -MP -MF ".deps/matching_merge.Tpo" -c -o matching_merge.o matching_merge.cpp; \ |
285 | | :info:build then mv -f ".deps/matching_merge.Tpo" ".deps/matching_merge.Po"; else rm -f ".deps/matching_merge.Tpo"; exit 1; fi |
286 | | :info:build if /usr/bin/clang++ -DHAVE_CONFIG_H -I. -I. -I.. -I../src -I/opt/local/include -I/usr/include -Wall -Wno-strict-aliasing -g -gdwarf-2 -Wuninitialized -arch x86_64 -O3 -pipe -O2 -arch x86_64 -DNDEBUG -pthread -I/opt/local/include -I/opt/local/include -MT graph_optimize.o -MD -MP -MF ".deps/graph_optimize.Tpo" -c -o graph_optimize.o graph_optimize.cpp; \ |
287 | | :info:build then mv -f ".deps/graph_optimize.Tpo" ".deps/graph_optimize.Po"; else rm -f ".deps/graph_optimize.Tpo"; exit 1; fi |
288 | | :info:build if /usr/bin/clang++ -DHAVE_CONFIG_H -I. -I. -I.. -I../src -I/opt/local/include -I/usr/include -Wall -Wno-strict-aliasing -g -gdwarf-2 -Wuninitialized -arch x86_64 -O3 -pipe -O2 -arch x86_64 -DNDEBUG -pthread -I/opt/local/include -I/opt/local/include -MT biascorrection.o -MD -MP -MF ".deps/biascorrection.Tpo" -c -o biascorrection.o biascorrection.cpp; \ |
289 | | :info:build then mv -f ".deps/biascorrection.Tpo" ".deps/biascorrection.Po"; else rm -f ".deps/biascorrection.Tpo"; exit 1; fi |
290 | | :info:build if /usr/bin/clang++ -DHAVE_CONFIG_H -I. -I. -I.. -I../src -I/opt/local/include -I/usr/include -Wall -Wno-strict-aliasing -g -gdwarf-2 -Wuninitialized -arch x86_64 -O3 -pipe -O2 -arch x86_64 -DNDEBUG -pthread -I/opt/local/include -I/opt/local/include -MT jensen_shannon.o -MD -MP -MF ".deps/jensen_shannon.Tpo" -c -o jensen_shannon.o jensen_shannon.cpp; \ |
291 | | :info:build then mv -f ".deps/jensen_shannon.Tpo" ".deps/jensen_shannon.Po"; else rm -f ".deps/jensen_shannon.Tpo"; exit 1; fi |
292 | | :info:build if /usr/bin/clang++ -DHAVE_CONFIG_H -I. -I. -I.. -I../src -I/opt/local/include -I/usr/include -Wall -Wno-strict-aliasing -g -gdwarf-2 -Wuninitialized -arch x86_64 -O3 -pipe -O2 -arch x86_64 -DNDEBUG -pthread -I/opt/local/include -I/opt/local/include -MT GFaSeqGet.o -MD -MP -MF ".deps/GFaSeqGet.Tpo" -c -o GFaSeqGet.o GFaSeqGet.cpp; \ |
293 | | :info:build then mv -f ".deps/GFaSeqGet.Tpo" ".deps/GFaSeqGet.Po"; else rm -f ".deps/GFaSeqGet.Tpo"; exit 1; fi |
294 | | :info:build if /usr/bin/clang++ -DHAVE_CONFIG_H -I. -I. -I.. -I../src -I/opt/local/include -I/usr/include -Wall -Wno-strict-aliasing -g -gdwarf-2 -Wuninitialized -arch x86_64 -O3 -pipe -O2 -arch x86_64 -DNDEBUG -pthread -I/opt/local/include -I/opt/local/include -MT gff.o -MD -MP -MF ".deps/gff.Tpo" -c -o gff.o gff.cpp; \ |
295 | | :info:build then mv -f ".deps/gff.Tpo" ".deps/gff.Po"; else rm -f ".deps/gff.Tpo"; exit 1; fi |
296 | | :info:build if /usr/bin/clang++ -DHAVE_CONFIG_H -I. -I. -I.. -I../src -I/opt/local/include -I/usr/include -Wall -Wno-strict-aliasing -g -gdwarf-2 -Wuninitialized -arch x86_64 -O3 -pipe -O2 -arch x86_64 -DNDEBUG -pthread -I/opt/local/include -I/opt/local/include -MT gtf_tracking.o -MD -MP -MF ".deps/gtf_tracking.Tpo" -c -o gtf_tracking.o gtf_tracking.cpp; \ |
297 | | :info:build then mv -f ".deps/gtf_tracking.Tpo" ".deps/gtf_tracking.Po"; else rm -f ".deps/gtf_tracking.Tpo"; exit 1; fi |
298 | | :info:build if /usr/bin/clang++ -DHAVE_CONFIG_H -I. -I. -I.. -I../src -I/opt/local/include -I/usr/include -Wall -Wno-strict-aliasing -g -gdwarf-2 -Wuninitialized -arch x86_64 -O3 -pipe -O2 -arch x86_64 -DNDEBUG -pthread -I/opt/local/include -I/opt/local/include -MT cufflinks.o -MD -MP -MF ".deps/cufflinks.Tpo" -c -o cufflinks.o cufflinks.cpp; \ |
299 | | :info:build then mv -f ".deps/cufflinks.Tpo" ".deps/cufflinks.Po"; else rm -f ".deps/cufflinks.Tpo"; exit 1; fi |
300 | | :info:build if /usr/bin/clang++ -DHAVE_CONFIG_H -I. -I. -I.. -I../src -I/opt/local/include -I/usr/include -Wall -Wno-strict-aliasing -g -gdwarf-2 -Wuninitialized -arch x86_64 -O3 -pipe -O2 -arch x86_64 -DNDEBUG -pthread -I/opt/local/include -I/opt/local/include -MT cuffcompare.o -MD -MP -MF ".deps/cuffcompare.Tpo" -c -o cuffcompare.o cuffcompare.cpp; \ |
301 | | :info:build then mv -f ".deps/cuffcompare.Tpo" ".deps/cuffcompare.Po"; else rm -f ".deps/cuffcompare.Tpo"; exit 1; fi |
302 | | :info:build if /usr/bin/clang++ -DHAVE_CONFIG_H -I. -I. -I.. -I../src -I/opt/local/include -I/usr/include -Wall -Wno-strict-aliasing -g -gdwarf-2 -Wuninitialized -arch x86_64 -O3 -pipe -O2 -arch x86_64 -DNDEBUG -pthread -I/opt/local/include -I/opt/local/include -MT cuffdiff.o -MD -MP -MF ".deps/cuffdiff.Tpo" -c -o cuffdiff.o cuffdiff.cpp; \ |
303 | | :info:build then mv -f ".deps/cuffdiff.Tpo" ".deps/cuffdiff.Po"; else rm -f ".deps/cuffdiff.Tpo"; exit 1; fi |
304 | | :info:build if /usr/bin/clang++ -DHAVE_CONFIG_H -I. -I. -I.. -I../src -I/opt/local/include -I/usr/include -Wall -Wno-strict-aliasing -g -gdwarf-2 -Wuninitialized -arch x86_64 -O3 -pipe -O2 -arch x86_64 -DNDEBUG -pthread -I/opt/local/include -I/opt/local/include -MT gtf_to_sam.o -MD -MP -MF ".deps/gtf_to_sam.Tpo" -c -o gtf_to_sam.o gtf_to_sam.cpp; \ |
305 | | :info:build then mv -f ".deps/gtf_to_sam.Tpo" ".deps/gtf_to_sam.Po"; else rm -f ".deps/gtf_to_sam.Tpo"; exit 1; fi |
306 | | :info:build In file included from GFaSeqGet.cpp:1: |
307 | | :info:build In file included from ./GFaSeqGet.h:4: |
308 | | :info:build ./GList.hh:972:6: warning: unused variable 'result' [-Wunused-variable] |
309 | | :info:build int result=-1; |
310 | | :info:build ^ |
311 | | :info:build In file included from gtf_tracking.cpp:11: |
312 | | :info:build In file included from ./gtf_tracking.h:12: |
313 | | :info:build In file included from ./gff.h:7: |
314 | | :info:build In file included from ./GFaSeqGet.h:4: |
315 | | :info:build ./GList.hh:972:6: warning: unused variable 'result' [-Wunused-variable] |
316 | | :info:build int result=-1; |
317 | | :info:build ^ |
318 | | :info:build In file included from gff.cpp:1: |
319 | | :info:build In file included from ./gff.h:7: |
320 | | :info:build In file included from ./GFaSeqGet.h:4: |
321 | | :info:build ./GList.hh:972:6: warning: unused variable 'result' [-Wunused-variable] |
322 | | :info:build int result=-1; |
323 | | :info:build ^ |
324 | | :info:build In file included from cuffcompare.cpp:10: |
325 | | :info:build In file included from ./gtf_tracking.h:12: |
326 | | :info:build In file included from ./gff.h:7: |
327 | | :info:build In file included from ./GFaSeqGet.h:4: |
328 | | :info:build ./GList.hh:972:6: warning: unused variable 'result' [-Wunused-variable] |
329 | | :info:build int result=-1; |
330 | | :info:build ^ |
331 | | :info:build ./GList.hh:507:4: error: use of undeclared identifier 'idxInsert' |
332 | | :info:build idxInsert(result, *item); |
333 | | :info:build ^ |
334 | | :info:build this-> |
335 | | :info:build ./GList.hh:107:33: note: in instantiation of member function 'GArray<GffCDSeg>::Add' requested here |
336 | | :info:build int Add(OBJ& item) { return Add(&item); } //both will CREATE a new OBJ and COPY to it |
337 | | :info:build ^ |
338 | | :info:build gff.cpp:1386:13: note: in instantiation of member function 'GArray<GffCDSeg>::Add' requested here |
339 | | :info:build cds.Add(cdseg); |
340 | | :info:build ^ |
341 | | :info:build ./GList.hh:52:10: note: must qualify identifier to find this declaration in dependent base class |
342 | | :info:build void idxInsert(int idx, OBJ& item); |
343 | | :info:build ^ |
344 | | :info:build GFaSeqGet.cpp:62:17: error: use of undeclared identifier 'fseeko'; did you mean 'fseek'? |
345 | | :info:build if (fofs!=0) { fseeko(fh,fofs,SEEK_SET); } //e.g. for offsets provided by cdbyank |
346 | | :info:build ^~~~~~ |
347 | | :info:build fseek |
348 | | :info:build /usr/include/stdio.h:259:6: note: 'fseek' declared here |
349 | | :info:build int fseek(FILE *, long, int); |
350 | | :info:build ^ |
351 | | :info:build GFaSeqGet.cpp:128:2: error: use of undeclared identifier 'fseeko'; did you mean 'fseek'? |
352 | | :info:build fseeko(fh,fseqstart,SEEK_SET); |
353 | | :info:build ^~~~~~ |
354 | | :info:build fseek |
355 | | :info:build /usr/include/stdio.h:259:6: note: 'fseek' declared here |
356 | | :info:build int fseek(FILE *, long, int); |
357 | | :info:build ^ |
358 | | :info:build GFaSeqGet.cpp:261:3: error: use of undeclared identifier 'fseeko'; did you mean 'fseek'? |
359 | | :info:build fseeko(fh, fstart, SEEK_SET); |
360 | | :info:build ^~~~~~ |
361 | | :info:build fseek |
362 | | :info:build /usr/include/stdio.h:259:6: note: 'fseek' declared here |
363 | | :info:build int fseek(FILE *, long, int); |
364 | | :info:build ^ |
365 | | :info:build GFaSeqGet.cpp:280:5: error: use of undeclared identifier 'fseeko'; did you mean 'fseek'? |
366 | | :info:build fseeko(fh, lendlen, SEEK_CUR); |
367 | | :info:build ^~~~~~ |
368 | | :info:build fseek |
369 | | :info:build /usr/include/stdio.h:259:6: note: 'fseek' declared here |
370 | | :info:build int fseek(FILE *, long, int); |
371 | | :info:build ^ |
372 | | :info:build GFaSeqGet.cpp:300:5: error: use of undeclared identifier 'fseeko'; did you mean 'fseek'? |
373 | | :info:build fseeko(fh, lendlen, SEEK_CUR); |
374 | | :info:build ^~~~~~ |
375 | | :info:build fseek |
376 | | :info:build /usr/include/stdio.h:259:6: note: 'fseek' declared here |
377 | | :info:build int fseek(FILE *, long, int); |
378 | | :info:build ^ |
379 | | :info:build ./GList.hh:507:4: error: use of undeclared identifier 'idxInsert' |
380 | | :info:build idxInsert(result, *item); |
381 | | :info:build ^ |
382 | | :info:build this-> |
383 | | :info:build ./GList.hh:107:33: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
384 | | :info:build int Add(OBJ& item) { return Add(&item); } //both will CREATE a new OBJ and COPY to it |
385 | | :info:build ^ |
386 | | :info:build ./gtf_tracking.h:314:12: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
387 | | :info:build uexons.Add(seg); |
388 | | :info:build ^ |
389 | | :info:build ./GList.hh:52:10: note: must qualify identifier to find this declaration in dependent base class |
390 | | :info:build void idxInsert(int idx, OBJ& item); |
391 | | :info:build ^ |
392 | | :info:build ./GList.hh:772:5: error: use of undeclared identifier 'setCapacity' |
393 | | :info:build setCapacity(this->fCapacity+list.fCount); |
394 | | :info:build ^ |
395 | | :info:build this-> |
396 | | :info:build ./gtf_tracking.h:650:10: note: in instantiation of member function 'GList<GffObj>::Add' requested here |
397 | | :info:build qmrnas.Add(loc.mrnas); |
398 | | :info:build ^ |
399 | | :info:build ./GList.hh:171:10: note: must qualify identifier to find this declaration in dependent base class |
400 | | :info:build void setCapacity(int NewCapacity); |
401 | | :info:build ^ |
402 | | :info:build 1 warning and 1 error generated. |
403 | | :info:build ./GList.hh:537:5: error: use of undeclared identifie1r warning and 5 errors generated. |
404 | | :info:build 'setCapacity' |
405 | | :info:build setCapacity(this->fCapacity+list.fCount); |
406 | | :info:build ^ |
407 | | :info:build this-> |
408 | | :info:build ./gtf_tracking.h:653:11: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
409 | | :info:build qmexons.Add(loc.mexons); |
410 | | :info:build ^ |
411 | | :info:build ./GList.hh:76:10: note: must qualify identifier to find this declaration in dependent base class |
412 | | :info:build void setCapacity(int NewCapacity); |
413 | | :info:build ^ |
414 | | :info:build 1 warning and 3 errors generated. |
415 | | :info:build ./GList.hh:507:4: error: use of undeclared identifier 'idxInsert' |
416 | | :info:build idxInsert(result, *item); |
417 | | :info:build ^ |
418 | | :info:build this-> |
419 | | :info:build ./GList.hh:107:33: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
420 | | :info:build int Add(OBJ& item) { return Add(&item); } //both will CREATE a new OBJ and COPY to it |
421 | | :info:build ^ |
422 | | :info:build ./gtf_tracking.h:314:12: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
423 | | :info:build uexons.Add(seg); |
424 | | :info:build ^ |
425 | | :info:build ./GList.hh:52:10: note: must qualify identifier to find this declaration in dependent base class |
426 | | :info:build void idxInsert(int idx, OBJ& item); |
427 | | :info:build ^ |
428 | | :info:build ./GList.hh:772:5: error: use of undeclared identifier 'setCapacity' |
429 | | :info:build setCapacity(this->fCapacity+list.fCount); |
430 | | :info:build ^ |
431 | | :info:build this-> |
432 | | :info:build ./gtf_tracking.h:650:10: note: in instantiation of member function 'GList<GffObj>::Add' requested here |
433 | | :info:build qmrnas.Add(loc.mrnas); |
434 | | :info:build ^ |
435 | | :info:build ./GList.hh:171:10: note: must qualify identifier to find this declaration in dependent base class |
436 | | :info:build void setCapacity(int NewCapacity); |
437 | | :info:build ^ |
438 | | :info:build ./GList.hh:537:5: error: use of undeclared identifier 'setCapacity' |
439 | | :info:build setCapacity(this->fCapacity+list.fCount); |
440 | | :info:build ^ |
441 | | :info:build this-> |
442 | | :info:build ./gtf_tracking.h:653:11: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
443 | | :info:build qmexons.Add(loc.mexons); |
444 | | :info:build ^ |
445 | | :info:build ./GList.hh:76:10: note: must qualify identifier to find this declaration in dependent base class |
446 | | :info:build void setCapacity(int NewCapacity); |
447 | | :info:build ^ |
448 | | :info:build 1 warning and 3 errors generated. |
449 | | :info:build make[2]: *** [gff.o] Error 1 |
450 | | :info:build make[2]: *** Waiting for unfinished jobs.... |
451 | | :info:build make[2]: *** [gtf_tracking.o] Error 1 |
452 | | :info:build make[2]: *** [GFaSeqGet.o] Error 1 |
453 | | :info:build make[2]: *** [cuffcompare.o] Error 1 |
454 | | :info:build In file included from jensen_shannon.cpp:12: |
455 | | :info:build In file included from ./jensen_shannon.h:10: |
456 | | :info:build In file included from /opt/local/include/boost/numeric/ublas/matrix.hpp:16: |
457 | | :info:build In file included from /opt/local/include/boost/numeric/ublas/vector.hpp:19: |
458 | | :info:build In file included from /opt/local/include/boost/numeric/ublas/storage.hpp:26: |
459 | | :info:build /opt/local/include/boost/numeric/ublas/traits.hpp:45:27: warning: unused function 'boost_numeric_ublas_abs' [-Wunused-function] |
460 | | :info:build template<> unsigned int boost_numeric_ublas_abs (const unsigned int& t) { |
461 | | :info:build ^ |
462 | | :info:build /opt/local/include/boost/numeric/ublas/traits.hpp:49:28: warning: unused function 'boost_numeric_ublas_abs' [-Wunused-function] |
463 | | :info:build template<> unsigned long boost_numeric_ublas_abs (const unsigned long& t) { |
464 | | :info:build ^ |
465 | | :info:build 2 warnings generated. |
466 | | :info:build In file included from genes.cpp:10: |
467 | | :info:build In file included from ./genes.h:17: |
468 | | :info:build ./scaffolds.h:247:34: warning: unused variable 'op' [-Wunused-variable] |
469 | | :info:build foreach(AugmentedCuffOp& op, aug_ops) |
470 | | :info:build ^ |
471 | | :info:build /opt/local/include/boost/foreach.hpp:1108:14: note: expanded from macro 'BOOST_FOREACH' |
472 | | :info:build for (VAR = BOOST_FOREACH_DEREF(COL); !BOOST_FOREACH_ID(_foreach_continue); BOOST_FOREACH_ID(_foreach_continue) = true) |
473 | | :info:build ^ |
474 | | :info:build In file included from genes.cpp:10: |
475 | | :info:build In file included from ./genes.h:18: |
476 | | :info:build In file included from ./abundances.h:22: |
477 | | :info:build In file included from ./bundles.h:21: |
478 | | :info:build In file included from ./gtf_tracking.h:12: |
479 | | :info:build In file included from ./gff.h:7: |
480 | | :info:build In file included from ./GFaSeqGet.h:4: |
481 | | :info:build ./GList.hh:972:6: warning: unused variable 'result' [-Wunused-variable] |
482 | | :info:build int result=-1; |
483 | | :info:build ^ |
484 | | :info:build In file included from scaffold_graph.cpp:12: |
485 | | :info:build ./scaffolds.h:247:34: warning: unused variable 'op' [-Wunused-variable] |
486 | | :info:build foreach(AugmentedCuffOp& op, aug_ops) |
487 | | :info:build ^ |
488 | | :info:build /opt/local/include/boost/foreach.hpp:1108:14: note: expanded from macro 'BOOST_FOREACH' |
489 | | :info:build for (VAR = BOOST_FOREACH_DEREF(COL); !BOOST_FOREACH_ID(_foreach_continue); BOOST_FOREACH_ID(_foreach_continue) = true) |
490 | | :info:build ^ |
491 | | :info:build In file included from differential.cpp:14: |
492 | | :info:build In file included from ./abundances.h:21: |
493 | | :info:build ./scaffolds.h:247:34: warning: unused variable 'op' [-Wunused-variable] |
494 | | :info:build foreach(AugmentedCuffOp& op, aug_ops) |
495 | | :info:build ^ |
496 | | :info:build /opt/local/include/boost/foreach.hpp:1108:14: note: expanded from macro 'BOOST_FOREACH' |
497 | | :info:build for (VAR = BOOST_FOREACH_DEREF(COL); !BOOST_FOREACH_ID(_foreach_continue); BOOST_FOREACH_ID(_foreach_continue) = true) |
498 | | :info:build ^ |
499 | | :info:build In file included from biascorrection.cpp:10: |
500 | | :info:build In file included from ./biascorrection.h:14: |
501 | | :info:build In file included from ./bundles.h:20: |
502 | | :info:build ./scaffolds.h:247:34: warning: unused variable 'op' [-Wunused-variable] |
503 | | :info:build foreach(AugmentedCuffOp& op, aug_ops) |
504 | | :info:build ^ |
505 | | :info:build /opt/local/include/boost/foreach.hpp:1108:14: note: expanded from macro 'BOOST_FOREACH' |
506 | | :info:build for (VAR = BOOST_FOREACH_DEREF(COL); !BOOST_FOREACH_ID(_foreach_continue); BOOST_FOREACH_ID(_foreach_continue) = true) |
507 | | :info:build ^ |
508 | | :info:build In file included from differential.cpp:14: |
509 | | :info:build In file included from ./abundances.h:22: |
510 | | :info:build In file included from ./bundles.h:21: |
511 | | :info:build In file included from ./gtf_tracking.h:12: |
512 | | :info:build In file included from ./gff.h:7: |
513 | | :info:build In file included from ./GFaSeqGet.h:4: |
514 | | :info:build ./GList.hh:972:6: warning: unused variable 'result' [-Wunused-variable] |
515 | | :info:build int result=-1; |
516 | | :info:build ^ |
517 | | :info:build In file included from abundances.cpp:11: |
518 | | :info:build In file included from ./abundances.h:21: |
519 | | :info:build ./scaffolds.h:247:34: warning: unused variable 'op' [-Wunused-variable] |
520 | | :info:build foreach(AugmentedCuffOp& op, aug_ops) |
521 | | :info:build ^ |
522 | | :info:build /opt/local/include/boost/foreach.hpp:1108:14: note: expanded from macro 'BOOST_FOREACH' |
523 | | :info:build for (VAR = BOOST_FOREACH_DEREF(COL); !BOOST_FOREACH_ID(_foreach_continue); BOOST_FOREACH_ID(_foreach_continue) = true) |
524 | | :info:build ^ |
525 | | :info:build In file included from biascorrection.cpp:10: |
526 | | :info:build In file included from ./biascorrection.h:14: |
527 | | :info:build In file included from ./bundles.h:21: |
528 | | :info:build In file included from ./gtf_tracking.h:12: |
529 | | :info:build In file included from ./gff.h:7: |
530 | | :info:build In file included from ./GFaSeqGet.h:4: |
531 | | :info:build ./GList.hh:972:6: warning: unused variable 'result' [-Wunused-variable] |
532 | | :info:build int result=-1; |
533 | | :info:build ^ |
534 | | :info:build In file included from matching_merge.cpp:10: |
535 | | :info:build In file included from ./matching_merge.h:20: |
536 | | :info:build ./scaffolds.h:247:34: warning: unused variable 'op' [-Wunused-variable] |
537 | | :info:build foreach(AugmentedCuffOp& op, aug_ops) |
538 | | :info:build ^ |
539 | | :info:build /opt/local/include/boost/foreach.hpp:1108:14: note: expanded from macro 'BOOST_FOREACH' |
540 | | :info:build for (VAR = BOOST_FOREACH_DEREF(COL); !BOOST_FOREACH_ID(_foreach_continue); BOOST_FOREACH_ID(_foreach_continue) = true) |
541 | | :info:build ^ |
542 | | :info:build In file included from abundances.cpp:11: |
543 | | :info:build In file included from ./abundances.h:22: |
544 | | :info:build In file included from ./bundles.h:21: |
545 | | :info:build In file included from ./gtf_tracking.h:12: |
546 | | :info:build In file included from ./gff.h:7: |
547 | | :info:build In file included from ./GFaSeqGet.h:4: |
548 | | :info:build ./GList.hh:972:6: warning: unused variable 'result' [-Wunused-variable] |
549 | | :info:build int result=-1; |
550 | | :info:build ^ |
551 | | :info:build In file included from scaffolds.cpp:13: |
552 | | :info:build ./scaffolds.h:247:34: warning: unused variable 'op' [-Wunused-variable] |
553 | | :info:build foreach(AugmentedCuffOp& op, aug_ops) |
554 | | :info:build ^ |
555 | | :info:build /opt/local/include/boost/foreach.hpp:1108:14: note: expanded from macro 'BOOST_FOREACH' |
556 | | :info:build for (VAR = BOOST_FOREACH_DEREF(COL); !BOOST_FOREACH_ID(_foreach_continue); BOOST_FOREACH_ID(_foreach_continue) = true) |
557 | | :info:build ^ |
558 | | :info:build scaffolds.cpp:1144:47: warning: '&&' within '||' [-Wlogical-op-parentheses] |
559 | | :info:build if (hit.left_alignment()->antisense_align() && strand() != CUFF_REV |
560 | | :info:build ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ |
561 | | :info:build scaffolds.cpp:1144:47: note: place parentheses around the '&&' expression to silence this warning |
562 | | :info:build if (hit.left_alignment()->antisense_align() && strand() != CUFF_REV |
563 | | :info:build ^ |
564 | | :info:build ( ) |
565 | | :info:build scaffolds.cpp:1145:50: warning: '&&' within '||' [-Wlogical-op-parentheses] |
566 | | :info:build || !(hit.left_alignment()->antisense_align()) && strand() == CUFF_REV) |
567 | | :info:build ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ |
568 | | :info:build scaffolds.cpp:1145:50: note: place parentheses around the '&&' expression to silence this warning |
569 | | :info:build || !(hit.left_alignment()->antisense_align()) && strand() == CUFF_REV) |
570 | | :info:build ^ |
571 | | :info:build ( ) |
572 | | :info:build In file included from cuffdiff.cpp:27: |
573 | | :info:build In file included from ./bundles.h:20: |
574 | | :info:build ./scaffolds.h:247:34: warning: unused variable 'op' [-Wunused-variable] |
575 | | :info:build foreach(AugmentedCuffOp& op, aug_ops) |
576 | | :info:build ^ |
577 | | :info:build /opt/local/include/boost/foreach.hpp:1108:14: note: expanded from macro 'BOOST_FOREACH' |
578 | | :info:build for (VAR = BOOST_FOREACH_DEREF(COL); !BOOST_FOREACH_ID(_foreach_continue); BOOST_FOREACH_ID(_foreach_continue) = true) |
579 | | :info:build ^ |
580 | | :info:build In file included from filters.cpp:10: |
581 | | :info:build In file included from ./filters.h:17: |
582 | | :info:build ./scaffolds.h:247:34: warning: unused variable 'op' [-Wunused-variable] |
583 | | :info:build foreach(AugmentedCuffOp& op, aug_ops) |
584 | | :info:build ^ |
585 | | :info:build /opt/local/include/boost/foreach.hpp:1108:14: note: expanded from macro 'BOOST_FOREACH' |
586 | | :info:build for (VAR = BOOST_FOREACH_DEREF(COL); !BOOST_FOREACH_ID(_foreach_continue); BOOST_FOREACH_ID(_foreach_continue) = true) |
587 | | :info:build ^ |
588 | | :info:build In file included from cuffdiff.cpp:27: |
589 | | :info:build In file included from ./bundles.h:21: |
590 | | :info:build In file included from ./gtf_tracking.h:12: |
591 | | :info:build In file included from ./gff.h:7: |
592 | | :info:build In file included from ./GFaSeqGet.h:4: |
593 | | :info:build ./GList.hh:972:6: warning: unused variable 'result' [-Wunused-variable] |
594 | | :info:build int result=-1; |
595 | | :info:build ^ |
596 | | :info:build In file included from gtf_to_sam.cpp:24: |
597 | | :info:build In file included from ./bundles.h:20: |
598 | | :info:build ./scaffolds.h:247:34: warning: unused variable 'op' [-Wunused-variable] |
599 | | :info:build foreach(AugmentedCuffOp& op, aug_ops) |
600 | | :info:build ^ |
601 | | :info:build /opt/local/include/boost/foreach.hpp:1108:14: note: expanded from macro 'BOOST_FOREACH' |
602 | | :info:build for (VAR = BOOST_FOREACH_DEREF(COL); !BOOST_FOREACH_ID(_foreach_continue); BOOST_FOREACH_ID(_foreach_continue) = true) |
603 | | :info:build ^ |
604 | | :info:build In file included from bundles.cpp:16: |
605 | | :info:build In file included from ./bundles.h:20: |
606 | | :info:build ./scaffolds.h:247:34: warning: unused variable 'op' [-Wunused-variable] |
607 | | :info:build foreach(AugmentedCuffOp& op, aug_ops) |
608 | | :info:build ^ |
609 | | :info:build /opt/local/include/boost/foreach.hpp:1108:14: note: expanded from macro 'BOOST_FOREACH' |
610 | | :info:build for (VAR = BOOST_FOREACH_DEREF(COL); !BOOST_FOREACH_ID(_foreach_continue); BOOST_FOREACH_ID(_foreach_continue) = true) |
611 | | :info:build ^ |
612 | | :info:build In file included from gtf_to_sam.cpp:24: |
613 | | :info:build In file included from ./bundles.h:21: |
614 | | :info:build In file included from ./gtf_tracking.h:12: |
615 | | :info:build In file included from ./gff.h:7: |
616 | | :info:build In file included from ./GFaSeqGet.h:4: |
617 | | :info:build ./GList.hh:972:6: warning: unused variable 'result' [-Wunused-variable] |
618 | | :info:build int result=-1; |
619 | | :info:build ^ |
620 | | :info:build In file included from bundles.cpp:16: |
621 | | :info:build In file included from ./bundles.h:21: |
622 | | :info:build In file included from ./gtf_tracking.h:12: |
623 | | :info:build In file included from ./gff.h:7: |
624 | | :info:build In file included from ./GFaSeqGet.h:4: |
625 | | :info:build ./GList.hh:972:6: warning: unused variable 'result' [-Wunused-variable] |
626 | | :info:build int result=-1; |
627 | | :info:build ^ |
628 | | :info:build In file included from filters.cpp:10: |
629 | | :info:build In file included from ./filters.h:18: |
630 | | :info:build In file included from ./genes.h:18: |
631 | | :info:build In file included from ./abundances.h:22: |
632 | | :info:build In file included from ./bundles.h:21: |
633 | | :info:build In file included from ./gtf_tracking.h:12: |
634 | | :info:build In file included from ./gff.h:7: |
635 | | :info:build In file included from ./GFaSeqGet.h:4: |
636 | | :info:build ./GList.hh:972:6: warning: unused variable 'result' [-Wunused-variable] |
637 | | :info:build int result=-1; |
638 | | :info:build ^ |
639 | | :info:build In file included from graph_optimize.cpp:13: |
640 | | :info:build In file included from ./graph_optimize.h:17: |
641 | | :info:build In file included from ./bundles.h:20: |
642 | | :info:build ./scaffolds.h:247:34: warning: unused variable 'op' [-Wunused-variable] |
643 | | :info:build foreach(AugmentedCuffOp& op, aug_ops) |
644 | | :info:build ^ |
645 | | :info:build /opt/local/include/boost/foreach.hpp:1108:14: note: expanded from macro 'BOOST_FOREACH' |
646 | | :info:build for (VAR = BOOST_FOREACH_DEREF(COL); !BOOST_FOREACH_ID(_foreach_continue); BOOST_FOREACH_ID(_foreach_continue) = true) |
647 | | :info:build ^ |
648 | | :info:build bundles.cpp:1172:33: warning: expression result unused [-Wunused-value] |
649 | | :info:build itr->second.fwd_strand_frags; |
650 | | :info:build ~~~~~~~~~~~ ^~~~~~~~~~~~~~~~ |
651 | | :info:build In file included from graph_optimize.cpp:13: |
652 | | :info:build In file included from ./graph_optimize.h:17: |
653 | | :info:build In file included from ./bundles.h:21: |
654 | | :info:build In file included from ./gtf_tracking.h:12: |
655 | | :info:build In file included from ./gff.h:7: |
656 | | :info:build In file included from ./GFaSeqGet.h:4: |
657 | | :info:build ./GList.hh:972:6: warning: unused variable 'result' [-Wunused-variable] |
658 | | :info:build int result=-1; |
659 | | :info:build ^ |
660 | | :info:build ./GList.hh:507:4: error: use of undeclared identifier 'idxInsert' |
661 | | :info:build idxInsert(result, *item); |
662 | | :info:build ^ |
663 | | :info:build this-> |
664 | | :info:build ./GList.hh:107:33: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
665 | | :info:build int Add(OBJ& item) { return Add(&item); } //both will CREATE a new OBJ and COPY to it |
666 | | :info:build ^ |
667 | | :info:build ./gtf_tracking.h:314:12: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
668 | | :info:build uexons.Add(seg); |
669 | | :info:build ^ |
670 | | :info:build ./GList.hh:52:10: note: must qualify identifier to find this declaration in dependent base class |
671 | | :info:build void idxInsert(int idx, OBJ& item); |
672 | | :info:build ^ |
673 | | :info:build ./GList.hh:772:5: error: use of undeclared identifier 'setCapacity' |
674 | | :info:build setCapacity(this->fCapacity+list.fCount); |
675 | | :info:build ^ |
676 | | :info:build this-> |
677 | | :info:build ./gtf_tracking.h:650:10: note: in instantiation of member function 'GList<GffObj>::Add' requested here |
678 | | :info:build qmrnas.Add(loc.mrnas); |
679 | | :info:build ^ |
680 | | :info:build ./GList.hh:171:10: note: must qualify identifier to find this declaration in dependent base class |
681 | | :info:build void setCapacity(int NewCapacity); |
682 | | :info:build ^ |
683 | | :info:build ./GList.hh:537:5: error: use of undeclared identifier 'setCapacity' |
684 | | :info:build setCapacity(this->fCapacity+list.fCount); |
685 | | :info:build ^ |
686 | | :info:build this-> |
687 | | :info:build ./gtf_tracking.h:653:11: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
688 | | :info:build qmexons.Add(loc.mexons); |
689 | | :info:build ^ |
690 | | :info:build ./GList.hh:76:10: note: must qualify identifier to find this declaration in dependent base class |
691 | | :info:build void setCapacity(int NewCapacity); |
692 | | :info:build ^ |
693 | | :info:build In file included from assemble.cpp:48: |
694 | | :info:build In file included from ./assemble.h:26: |
695 | | :info:build In file included from ./bundles.h:20: |
696 | | :info:build ./scaffolds.h:247:34: warning: unused variable 'op' [-Wunused-variable] |
697 | | :info:build foreach(AugmentedCuffOp& op, aug_ops) |
698 | | :info:build ^ |
699 | | :info:build /opt/local/include/boost/foreach.hpp:1108:14: note: expanded from macro 'BOOST_FOREACH' |
700 | | :info:build for (VAR = BOOST_FOREACH_DEREF(COL); !BOOST_FOREACH_ID(_foreach_continue); BOOST_FOREACH_ID(_foreach_continue) = true) |
701 | | :info:build ^ |
702 | | :info:build In file included from clustering.cpp:10: |
703 | | :info:build In file included from ./clustering.h:38: |
704 | | :info:build In file included from ./abundances.h:21: |
705 | | :info:build ./scaffolds.h:247:34: warning: unused variable 'op' [-Wunused-variable] |
706 | | :info:build foreach(AugmentedCuffOp& op, aug_ops) |
707 | | :info:build ^ |
708 | | :info:build /opt/local/include/boost/foreach.hpp:1108:14: note: expanded from macro 'BOOST_FOREACH' |
709 | | :info:build for (VAR = BOOST_FOREACH_DEREF(COL); !BOOST_FOREACH_ID(_foreach_continue); BOOST_FOREACH_ID(_foreach_continue) = true) |
710 | | :info:build ^ |
711 | | :info:build In file included from assemble.cpp:48: |
712 | | :info:build In file included from ./assemble.h:26: |
713 | | :info:build In file included from ./bundles.h:21: |
714 | | :info:build In file included from ./gtf_tracking.h:12: |
715 | | :info:build In file included from ./gff.h:7: |
716 | | :info:build In file included from ./GFaSeqGet.h:4: |
717 | | :info:build ./GList.hh:972:6: warning: unused variable 'result' [-Wunused-variable] |
718 | | :info:build int result=-1; |
719 | | :info:build ^ |
720 | | :info:build In file included from clustering.cpp:10: |
721 | | :info:build In file included from ./clustering.h:38: |
722 | | :info:build In file included from ./abundances.h:22: |
723 | | :info:build In file included from ./bundles.h:21: |
724 | | :info:build In file included from ./gtf_tracking.h:12: |
725 | | :info:build In file included from ./gff.h:7: |
726 | | :info:build In file included from ./GFaSeqGet.h:4: |
727 | | :info:build ./GList.hh:972:6: warning: unused variable 'result' [-Wunused-variable] |
728 | | :info:build int result=-1; |
729 | | :info:build ^ |
730 | | :info:build 2 warnings and 3 errors generated. |
731 | | :info:build make[2]: *** [genes.o] Error 1 |
732 | | :info:build ./GList.hh:507:4: error: use of undeclared identifier 'idxInsert' |
733 | | :info:build idxInsert(result, *item); |
734 | | :info:build ^ |
735 | | :info:build this-> |
736 | | :info:build ./GList.hh:107:33: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
737 | | :info:build int Add(OBJ& item) { return Add(&item); } //both will CREATE a new OBJ and COPY to it |
738 | | :info:build ^ |
739 | | :info:build ./gtf_tracking.h:314:12: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
740 | | :info:build uexons.Add(seg); |
741 | | :info:build ^ |
742 | | :info:build ./GList.hh:52:10: note: must qualify identifier to find this declaration in dependent base class |
743 | | :info:build void idxInsert(int idx, OBJ& item); |
744 | | :info:build ^ |
745 | | :info:build ./GList.hh:772:5: error: use of undeclared identifier 'setCapacity' |
746 | | :info:build setCapacity(this->fCapacity+list.fCount); |
747 | | :info:build ^ |
748 | | :info:build this-> |
749 | | :info:build ./gtf_tracking.h:650:10: note: in instantiation of member function 'GList<GffObj>::Add' requested here |
750 | | :info:build qmrnas.Add(loc.mrnas); |
751 | | :info:build ^ |
752 | | :info:build ./GList.hh:171:10: note: must qualify identifier to find this declaration in dependent base class |
753 | | :info:build void setCapacity(int NewCapacity); |
754 | | :info:build ^ |
755 | | :info:build ./GList.hh:537:5: error: use of undeclared identifier 'setCapacity' |
756 | | :info:build setCapacity(this->fCapacity+list.fCount); |
757 | | :info:build ^ |
758 | | :info:build this-> |
759 | | :info:build ./gtf_tracking.h:653:11: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
760 | | :info:build qmexons.Add(loc.mexons); |
761 | | :info:build ^ |
762 | | :info:build ./GList.hh:76:10: note: must qualify identifier to find this declaration in dependent base class |
763 | | :info:build void setCapacity(int NewCapacity); |
764 | | :info:build ^ |
765 | | :info:build In file included from differential.cpp:15: |
766 | | :info:build In file included from ./differential.h:23: |
767 | | :info:build In file included from /opt/local/include/boost/graph/adjacency_list.hpp:45: |
768 | | :info:build In file included from /opt/local/include/boost/graph/named_graph.hpp:17: |
769 | | :info:build /opt/local/include/boost/multi_index/hashed_index.hpp:1254:10: error: no member named 'BOOST_FOREACH' in namespace 'boost' |
770 | | :info:build boost::foreach::tag) |
771 | | :info:build ~~~~~~~^ |
772 | | :info:build ./common.h:26:25: note: expanded from macro 'foreach' |
773 | | :info:build #define foreach BOOST_FOREACH |
774 | | :info:build ^ |
775 | | :info:build In file included from scaffold_graph.cpp:14: |
776 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
777 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_weight_map' [-Wunused-variable] |
778 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
779 | | :info:build ^ |
780 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:63:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
781 | | :info:build BOOST_BGL_ONE_PARAM_CREF(weight_map, edge_weight) \ |
782 | | :info:build ^ |
783 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
784 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
785 | | :info:build ^ |
786 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
787 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
788 | | :info:build ^ |
789 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
790 | | :info:build <scratch space>:174:1: note: expanded from macro '_' |
791 | | :info:build _weight_map |
792 | | :info:build ^ |
793 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
794 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
795 | | :info:build ^ |
796 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
797 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
798 | | :info:build ^ |
799 | | :info:build In file included from scaffold_graph.cpp:14: |
800 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
801 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_weight_map2' [-Wunused-variable] |
802 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
803 | | :info:build ^ |
804 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:64:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
805 | | :info:build BOOST_BGL_ONE_PARAM_CREF(weight_map2, edge_weight2) \ |
806 | | :info:build ^ |
807 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
808 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
809 | | :info:build ^ |
810 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
811 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
812 | | :info:build ^ |
813 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
814 | | :info:build <scratch space>:178:1: note: expanded from macro '_' |
815 | | :info:build _weight_map2 |
816 | | :info:build ^ |
817 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
818 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
819 | | :info:build ^ |
820 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
821 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
822 | | :info:build ^ |
823 | | :info:build In file included from scaffold_graph.cpp:14: |
824 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
825 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_distance_map' [-Wunused-variable] |
826 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
827 | | :info:build ^ |
828 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:65:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
829 | | :info:build BOOST_BGL_ONE_PARAM_CREF(distance_map, vertex_distance) \ |
830 | | :info:build ^ |
831 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
832 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
833 | | :info:build ^ |
834 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
835 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
836 | | :info:build ^ |
837 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
838 | | :info:build <scratch space>:182:1: note: expanded from macro '_' |
839 | | :info:build _distance_map |
840 | | :info:build ^ |
841 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
842 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
843 | | :info:build ^ |
844 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
845 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
846 | | :info:build ^ |
847 | | :info:build In file included from scaffold_graph.cpp:14: |
848 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
849 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_predecessor_map' [-Wunused-variable] |
850 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
851 | | :info:build ^ |
852 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:66:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
853 | | :info:build BOOST_BGL_ONE_PARAM_CREF(predecessor_map, vertex_predecessor) \ |
854 | | :info:build ^ |
855 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
856 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
857 | | :info:build ^ |
858 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
859 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
860 | | :info:build ^ |
861 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
862 | | :info:build <scratch space>:186:1: note: expanded from macro '_' |
863 | | :info:build _predecessor_map |
864 | | :info:build ^ |
865 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
866 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
867 | | :info:build ^ |
868 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
869 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
870 | | :info:build ^ |
871 | | :info:build In file included from scaffold_graph.cpp:14: |
872 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
873 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_rank_map' [-Wunused-variable] |
874 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
875 | | :info:build ^ |
876 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:67:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
877 | | :info:build BOOST_BGL_ONE_PARAM_CREF(rank_map, vertex_rank) \ |
878 | | :info:build ^ |
879 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
880 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
881 | | :info:build ^ |
882 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
883 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
884 | | :info:build ^ |
885 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
886 | | :info:build <scratch space>:190:1: note: expanded from macro '_' |
887 | | :info:build _rank_map |
888 | | :info:build ^ |
889 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
890 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
891 | | :info:build ^ |
892 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
893 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
894 | | :info:build ^ |
895 | | :info:build In file included from scaffold_graph.cpp:14: |
896 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
897 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_root_map' [-Wunused-variable] |
898 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
899 | | :info:build ^ |
900 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:68:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
901 | | :info:build BOOST_BGL_ONE_PARAM_CREF(root_map, vertex_root) \ |
902 | | :info:build ^ |
903 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
904 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
905 | | :info:build ^ |
906 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
907 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
908 | | :info:build ^ |
909 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
910 | | :info:build <scratch space>:194:1: note: expanded from macro '_' |
911 | | :info:build _root_map |
912 | | :info:build ^ |
913 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
914 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
915 | | :info:build ^ |
916 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
917 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
918 | | :info:build ^ |
919 | | :info:build In file included from scaffold_graph.cpp:14: |
920 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
921 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_edge_centrality_map' [-Wunused-variable] |
922 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
923 | | :info:build ^ |
924 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:70:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
925 | | :info:build BOOST_BGL_ONE_PARAM_CREF(edge_centrality_map, edge_centrality) \ |
926 | | :info:build ^ |
927 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
928 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
929 | | :info:build ^ |
930 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
931 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
932 | | :info:build ^ |
933 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
934 | | :info:build <scratch space>:202:1: note: expanded from macro '_' |
935 | | :info:build _edge_centrality_map |
936 | | :info:build ^ |
937 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
938 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
939 | | :info:build ^ |
940 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
941 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
942 | | :info:build ^ |
943 | | :info:build In file included from scaffold_graph.cpp:14: |
944 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
945 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_centrality_map' [-Wunused-variable] |
946 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
947 | | :info:build ^ |
948 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:71:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
949 | | :info:build BOOST_BGL_ONE_PARAM_CREF(centrality_map, vertex_centrality) \ |
950 | | :info:build ^ |
951 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
952 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
953 | | :info:build ^ |
954 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
955 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
956 | | :info:build ^ |
957 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
958 | | :info:build <scratch space>:206:1: note: expanded from macro '_' |
959 | | :info:build _centrality_map |
960 | | :info:build ^ |
961 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
962 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
963 | | :info:build ^ |
964 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
965 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
966 | | :info:build ^ |
967 | | :info:build In file included from scaffold_graph.cpp:14: |
968 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
969 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_parity_map' [-Wunused-variable] |
970 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
971 | | :info:build ^ |
972 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:72:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
973 | | :info:build BOOST_BGL_ONE_PARAM_CREF(parity_map, parity_map) \ |
974 | | :info:build ^ |
975 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
976 | | :info:build In file included from cufflinks.cpp#define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
977 | | :info:build ^ |
978 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9:25: |
979 | | :info:build In file included from ./clustering.h:19: |
980 | | :info:build In file included from /opt/local/include/boost/graph/adjacency_list.hpp: note: exp:45: |
981 | | :info:build In file included from /opt/local/include/boost/graph/named_graph.hpp:17: |
982 | | :info:build /opt/local/include/boost/multi_index/hashed_index.hpp:1254a:nde10: error: nod fr membomer na macrmed 'o 'BOOBOOSTST__PAFORRAMEACH' ETER_in namespacNAMe 'Eb' |
983 | | :info:build oost' |
984 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
985 | | :info:build ^ |
986 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
987 | | :info:build <scratch space>:210:1: note: expanded from macro '_' |
988 | | :info:build _parity_map |
989 | | :info:build ^ |
990 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
991 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
992 | | :info:build ^ |
993 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
994 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
995 | | :info:build ^ |
996 | | :info:build boost::foreach::tag) |
997 | | :info:build ~~~~~~~^ |
998 | | :info:build In file included from scaffold_graph.cpp./common.h:26::14: |
999 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
1000 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:257: warning: unus:ed var note: iabexple anded'_col for_rommap macro '' [foreach'-W |
1001 | | :info:build unused-variable] |
1002 | | :info:build #define foreach BOOST_FOREACH |
1003 | | :info:build ^ |
1004 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
1005 | | :info:build ^ |
1006 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:73:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
1007 | | :info:build BOOST_BGL_ONE_PARAM_CREF(color_map, vertex_color) \ |
1008 | | :info:build ^ |
1009 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
1010 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
1011 | | :info:build ^ |
1012 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
1013 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
1014 | | :info:build ^ |
1015 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
1016 | | :info:build <scratch space>:4:1: note: expanded from macro '_' |
1017 | | :info:build _color_map |
1018 | | :info:build ^ |
1019 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
1020 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
1021 | | :info:build ^ |
1022 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
1023 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
1024 | | :info:build ^ |
1025 | | :info:build In file included from scaffold_graph.cpp:14: |
1026 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
1027 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_edge_color_map' [-Wunused-variable] |
1028 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
1029 | | :info:build ^ |
1030 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:74:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
1031 | | :info:build BOOST_BGL_ONE_PARAM_CREF(edge_color_map, edge_color) \ |
1032 | | :info:build ^ |
1033 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
1034 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
1035 | | :info:build ^ |
1036 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
1037 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
1038 | | :info:build ^ |
1039 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
1040 | | :info:build <scratch space>:8:1: note: expanded from macro '_' |
1041 | | :info:build _edge_color_map |
1042 | | :info:build ^ |
1043 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
1044 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
1045 | | :info:build ^ |
1046 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
1047 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
1048 | | :info:build ^ |
1049 | | :info:build In file included from scaffold_graph.cpp:14: |
1050 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
1051 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_capacity_map' [-Wunused-variable] |
1052 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
1053 | | :info:build ^ |
1054 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:75:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
1055 | | :info:build BOOST_BGL_ONE_PARAM_CREF(capacity_map, edge_capacity) \ |
1056 | | :info:build ^ |
1057 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
1058 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
1059 | | :info:build ^ |
1060 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
1061 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
1062 | | :info:build ^ |
1063 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
1064 | | :info:build <scratch space>:12:1: note: expanded from macro '_' |
1065 | | :info:build _capacity_map |
1066 | | :info:build ^ |
1067 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
1068 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
1069 | | :info:build ^ |
1070 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
1071 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
1072 | | :info:build ^ |
1073 | | :info:build In file included from scaffold_graph.cpp:14: |
1074 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
1075 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_residual_capacity_map' [-Wunused-variable] |
1076 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
1077 | | :info:build ^ |
1078 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:76:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
1079 | | :info:build BOOST_BGL_ONE_PARAM_CREF(residual_capacity_map, edge_residual_capacity) \ |
1080 | | :info:build ^ |
1081 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
1082 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
1083 | | :info:build ^ |
1084 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
1085 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
1086 | | :info:build ^ |
1087 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
1088 | | :info:build <scratch space>:16:1: note: expanded from macro '_' |
1089 | | :info:build _residual_capacity_map |
1090 | | :info:build ^ |
1091 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
1092 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
1093 | | :info:build ^ |
1094 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
1095 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
1096 | | :info:build ^ |
1097 | | :info:build In file included from scaffold_graph.cpp:14: |
1098 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
1099 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_reverse_edge_map' [-Wunused-variable] |
1100 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
1101 | | :info:build ^ |
1102 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:77:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
1103 | | :info:build BOOST_BGL_ONE_PARAM_CREF(reverse_edge_map, edge_reverse) \ |
1104 | | :info:build ^ |
1105 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
1106 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
1107 | | :info:build ^ |
1108 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
1109 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
1110 | | :info:build ^ |
1111 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
1112 | | :info:build <scratch space>:20:1: note: expanded from macro '_' |
1113 | | :info:build _reverse_edge_map |
1114 | | :info:build ^ |
1115 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
1116 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
1117 | | :info:build ^ |
1118 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
1119 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
1120 | | :info:build ^ |
1121 | | :info:build In file included from scaffold_graph.cpp:14: |
1122 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
1123 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_discover_time_map' [-Wunused-variable] |
1124 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
1125 | | :info:build ^ |
1126 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:78:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
1127 | | :info:build BOOST_BGL_ONE_PARAM_CREF(discover_time_map, vertex_discover_time) \ |
1128 | | :info:build ^ |
1129 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
1130 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
1131 | | :info:build ^ |
1132 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
1133 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
1134 | | :info:build ^ |
1135 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
1136 | | :info:build <scratch space>:24:1: note: expanded from macro '_' |
1137 | | :info:build _discover_time_map |
1138 | | :info:build ^ |
1139 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
1140 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
1141 | | :info:build ^ |
1142 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
1143 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
1144 | | :info:build ^ |
1145 | | :info:build In file included from scaffold_graph.cpp:14: |
1146 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
1147 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_lowpoint_map' [-Wunused-variable] |
1148 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
1149 | | :info:build ^ |
1150 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:79:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
1151 | | :info:build BOOST_BGL_ONE_PARAM_CREF(lowpoint_map, vertex_lowpoint) \ |
1152 | | :info:build ^ |
1153 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
1154 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
1155 | | :info:build ^ |
1156 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
1157 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
1158 | | :info:build ^ |
1159 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
1160 | | :info:build <scratch space>:28:1: note: expanded from macro '_' |
1161 | | :info:build _lowpoint_map |
1162 | | :info:build ^ |
1163 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
1164 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
1165 | | :info:build ^ |
1166 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
1167 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
1168 | | :info:build ^ |
1169 | | :info:build In file included from scaffold_graph.cpp:14: |
1170 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
1171 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_vertex_index1_map' [-Wunused-variable] |
1172 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
1173 | | :info:build ^ |
1174 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:81:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
1175 | | :info:build BOOST_BGL_ONE_PARAM_CREF(vertex_index1_map, vertex_index1) \ |
1176 | | :info:build ^ |
1177 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
1178 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
1179 | | :info:build ^ |
1180 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
1181 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
1182 | | :info:build ^ |
1183 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
1184 | | :info:build <scratch space>:36:1: note: expanded from macro '_' |
1185 | | :info:build _vertex_index1_map |
1186 | | :info:build ^ |
1187 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
1188 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
1189 | | :info:build ^ |
1190 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
1191 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
1192 | | :info:build ^ |
1193 | | :info:build In file included from scaffold_graph.cpp:14: |
1194 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
1195 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_vertex_index2_map' [-Wunused-variable] |
1196 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
1197 | | :info:build ^ |
1198 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:82:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
1199 | | :info:build BOOST_BGL_ONE_PARAM_CREF(vertex_index2_map, vertex_index2) \ |
1200 | | :info:build ^ |
1201 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
1202 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
1203 | | :info:build ^ |
1204 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
1205 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
1206 | | :info:build ^ |
1207 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
1208 | | :info:build <scratch space>:40:1: note: expanded from macro '_' |
1209 | | :info:build _vertex_index2_map |
1210 | | :info:build ^ |
1211 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
1212 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
1213 | | :info:build ^ |
1214 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
1215 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
1216 | | :info:build ^ |
1217 | | :info:build In file included from scaffold_graph.cpp:14: |
1218 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
1219 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_vertex_assignment_map' [-Wunused-variable] |
1220 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
1221 | | :info:build ^ |
1222 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:83:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
1223 | | :info:build BOOST_BGL_ONE_PARAM_CREF(vertex_assignment_map, vertex_assignment_map) \ |
1224 | | :info:build ^ |
1225 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
1226 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
1227 | | :info:build ^ |
1228 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
1229 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
1230 | | :info:build ^ |
1231 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
1232 | | :info:build <scratch space>:44:1: note: expanded from macro '_' |
1233 | | :info:build _vertex_assignment_map |
1234 | | :info:build ^ |
1235 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
1236 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
1237 | | :info:build ^ |
1238 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
1239 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
1240 | | :info:build ^ |
1241 | | :info:build In file included from scaffold_graph.cpp:14: |
1242 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
1243 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_distance_compare' [-Wunused-variable] |
1244 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
1245 | | :info:build ^ |
1246 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:85:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
1247 | | :info:build BOOST_BGL_ONE_PARAM_CREF(distance_compare, distance_compare) \ |
1248 | | :info:build ^ |
1249 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
1250 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
1251 | | :info:build ^ |
1252 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
1253 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
1254 | | :info:build ^ |
1255 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
1256 | | :info:build <scratch space>:52:1: note: expanded from macro '_' |
1257 | | :info:build _distance_compare |
1258 | | :info:build ^ |
1259 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
1260 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
1261 | | :info:build ^ |
1262 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
1263 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
1264 | | :info:build ^ |
1265 | | :info:build In file included from scaffold_graph.cpp:14: |
1266 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
1267 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_distance_combine' [-Wunused-variable] |
1268 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
1269 | | :info:build ^ |
1270 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:86:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
1271 | | :info:build BOOST_BGL_ONE_PARAM_CREF(distance_combine, distance_combine) \ |
1272 | | :info:build ^ |
1273 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
1274 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
1275 | | :info:build ^ |
1276 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
1277 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
1278 | | :info:build ^ |
1279 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
1280 | | :info:build <scratch space>:56:1: note: expanded from macro '_' |
1281 | | :info:build _distance_combine |
1282 | | :info:build ^ |
1283 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
1284 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
1285 | | :info:build ^ |
1286 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
1287 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
1288 | | :info:build ^ |
1289 | | :info:build In file included from scaffold_graph.cpp:14: |
1290 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
1291 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_distance_inf' [-Wunused-variable] |
1292 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
1293 | | :info:build ^ |
1294 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:87:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
1295 | | :info:build BOOST_BGL_ONE_PARAM_CREF(distance_inf, distance_inf) \ |
1296 | | :info:build ^ |
1297 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
1298 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
1299 | | :info:build ^ |
1300 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
1301 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
1302 | | :info:build ^ |
1303 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
1304 | | :info:build <scratch space>:60:1: note: expanded from macro '_' |
1305 | | :info:build _distance_inf |
1306 | | :info:build ^ |
1307 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
1308 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
1309 | | :info:build ^ |
1310 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
1311 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
1312 | | :info:build ^ |
1313 | | :info:build In file included from scaffold_graph.cpp:14: |
1314 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
1315 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_distance_zero' [-Wunused-variable] |
1316 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
1317 | | :info:build ^ |
1318 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:88:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
1319 | | :info:build BOOST_BGL_ONE_PARAM_CREF(distance_zero, distance_zero) \ |
1320 | | :info:build ^ |
1321 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
1322 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
1323 | | :info:build ^ |
1324 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
1325 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
1326 | | :info:build ^ |
1327 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
1328 | | :info:build <scratch space>:64:1: note: expanded from macro '_' |
1329 | | :info:build _distance_zero |
1330 | | :info:build ^ |
1331 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
1332 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
1333 | | :info:build ^ |
1334 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
1335 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
1336 | | :info:build ^ |
1337 | | :info:build In file included from scaffold_graph.cpp:14: |
1338 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
1339 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_edge_copy' [-Wunused-variable] |
1340 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
1341 | | :info:build ^ |
1342 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:89:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
1343 | | :info:build BOOST_BGL_ONE_PARAM_CREF(edge_copy, edge_copy) \ |
1344 | | :info:build ^ |
1345 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
1346 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
1347 | | :info:build ^ |
1348 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
1349 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
1350 | | :info:build ^ |
1351 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
1352 | | :info:build <scratch space>:68:1: note: expanded from macro '_' |
1353 | | :info:build _edge_copy |
1354 | | :info:build ^ |
1355 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
1356 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
1357 | | :info:build ^ |
1358 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
1359 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
1360 | | :info:build ^ |
1361 | | :info:build In file included from scaffold_graph.cpp:14: |
1362 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
1363 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_vertex_copy' [-Wunused-variable] |
1364 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
1365 | | :info:build ^ |
1366 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:90:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
1367 | | :info:build BOOST_BGL_ONE_PARAM_CREF(vertex_copy, vertex_copy) \ |
1368 | | :info:build ^ |
1369 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
1370 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
1371 | | :info:build ^ |
1372 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
1373 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
1374 | | :info:build ^ |
1375 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
1376 | | :info:build <scratch space>:72:1: note: expanded from macro '_' |
1377 | | :info:build _vertex_copy |
1378 | | :info:build ^ |
1379 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
1380 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
1381 | | :info:build ^ |
1382 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
1383 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
1384 | | :info:build ^ |
1385 | | :info:build In file included from scaffold_graph.cpp:14: |
1386 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
1387 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_buffer' [-Wunused-variable] |
1388 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
1389 | | :info:build ^ |
1390 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:91:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
1391 | | :info:build BOOST_BGL_ONE_PARAM_REF(buffer, buffer_param) \ |
1392 | | :info:build ^ |
1393 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:333:44: note: expanded from macro 'BOOST_BGL_ONE_PARAM_REF' |
1394 | | :info:build #define BOOST_BGL_ONE_PARAM_REF(name, key) BOOST_PARAMETER_NAME(name) |
1395 | | :info:build ^ |
1396 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
1397 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
1398 | | :info:build ^ |
1399 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
1400 | | :info:build <scratch space>:76:1: note: expanded from macro '_' |
1401 | | :info:build _buffer |
1402 | | :info:build ^ |
1403 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
1404 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
1405 | | :info:build ^ |
1406 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
1407 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
1408 | | :info:build ^ |
1409 | | :info:build In file included from scaffold_graph.cpp:14: |
1410 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
1411 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_orig_to_copy' [-Wunused-variable] |
1412 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
1413 | | :info:build ^ |
1414 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:92:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
1415 | | :info:build BOOST_BGL_ONE_PARAM_CREF(orig_to_copy, orig_to_copy) \ |
1416 | | :info:build ^ |
1417 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
1418 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
1419 | | :info:build ^ |
1420 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
1421 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
1422 | | :info:build ^ |
1423 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
1424 | | :info:build <scratch space>:80:1: note: expanded from macro '_' |
1425 | | :info:build _orig_to_copy |
1426 | | :info:build ^ |
1427 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
1428 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
1429 | | :info:build ^ |
1430 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
1431 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
1432 | | :info:build ^ |
1433 | | :info:build In file included from scaffold_graph.cpp:14: |
1434 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
1435 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_isomorphism_map' [-Wunused-variable] |
1436 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
1437 | | :info:build ^ |
1438 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:93:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
1439 | | :info:build BOOST_BGL_ONE_PARAM_CREF(isomorphism_map, vertex_isomorphism) \ |
1440 | | :info:build ^ |
1441 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
1442 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
1443 | | :info:build ^ |
1444 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
1445 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
1446 | | :info:build ^ |
1447 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
1448 | | :info:build <scratch space>:84:1: note: expanded from macro '_' |
1449 | | :info:build _isomorphism_map |
1450 | | :info:build ^ |
1451 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
1452 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
1453 | | :info:build ^ |
1454 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
1455 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
1456 | | :info:build ^ |
1457 | | :info:build In file included from scaffold_graph.cpp:14: |
1458 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
1459 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_vertex_invariant' [-Wunused-variable] |
1460 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
1461 | | :info:build ^ |
1462 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:94:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
1463 | | :info:build BOOST_BGL_ONE_PARAM_CREF(vertex_invariant, vertex_invariant) \ |
1464 | | :info:build ^ |
1465 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
1466 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
1467 | | :info:build ^ |
1468 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
1469 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
1470 | | :info:build ^ |
1471 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
1472 | | :info:build <scratch space>:88:1: note: expanded from macro '_' |
1473 | | :info:build _vertex_invariant |
1474 | | :info:build ^ |
1475 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
1476 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
1477 | | :info:build ^ |
1478 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
1479 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
1480 | | :info:build ^ |
1481 | | :info:build In file included from scaffold_graph.cpp:14: |
1482 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
1483 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_vertex_invariant1' [-Wunused-variable] |
1484 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
1485 | | :info:build ^ |
1486 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:95:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
1487 | | :info:build BOOST_BGL_ONE_PARAM_CREF(vertex_invariant1, vertex_invariant1) \ |
1488 | | :info:build ^ |
1489 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
1490 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
1491 | | :info:build ^ |
1492 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
1493 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
1494 | | :info:build ^ |
1495 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
1496 | | :info:build <scratch space>:92:1: note: expanded from macro '_' |
1497 | | :info:build _vertex_invariant1 |
1498 | | :info:build ^ |
1499 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
1500 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
1501 | | :info:build ^ |
1502 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
1503 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
1504 | | :info:build ^ |
1505 | | :info:build In file included from scaffold_graph.cpp:14: |
1506 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
1507 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_vertex_invariant2' [-Wunused-variable] |
1508 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
1509 | | :info:build ^ |
1510 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:96:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
1511 | | :info:build BOOST_BGL_ONE_PARAM_CREF(vertex_invariant2, vertex_invariant2) \ |
1512 | | :info:build ^ |
1513 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
1514 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
1515 | | :info:build ^ |
1516 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
1517 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
1518 | | :info:build ^ |
1519 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
1520 | | :info:build <scratch space>:96:1: note: expanded from macro '_' |
1521 | | :info:build _vertex_invariant2 |
1522 | | :info:build ^ |
1523 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
1524 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
1525 | | :info:build ^ |
1526 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
1527 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
1528 | | :info:build ^ |
1529 | | :info:build In file included from scaffold_graph.cpp:14: |
1530 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
1531 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_vertex_max_invariant' [-Wunused-variable] |
1532 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
1533 | | :info:build ^ |
1534 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:97:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
1535 | | :info:build BOOST_BGL_ONE_PARAM_CREF(vertex_max_invariant, vertex_max_invariant) \ |
1536 | | :info:build ^ |
1537 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
1538 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
1539 | | :info:build ^ |
1540 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
1541 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
1542 | | :info:build ^ |
1543 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
1544 | | :info:build <scratch space>:100:1: note: expanded from macro '_' |
1545 | | :info:build _vertex_max_invariant |
1546 | | :info:build ^ |
1547 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
1548 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
1549 | | :info:build ^ |
1550 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
1551 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
1552 | | :info:build ^ |
1553 | | :info:build In file included from scaffold_graph.cpp:14: |
1554 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
1555 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_polling' [-Wunused-variable] |
1556 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
1557 | | :info:build ^ |
1558 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:98:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
1559 | | :info:build BOOST_BGL_ONE_PARAM_CREF(polling, polling) \ |
1560 | | :info:build ^ |
1561 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
1562 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
1563 | | :info:build ^ |
1564 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
1565 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
1566 | | :info:build ^ |
1567 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
1568 | | :info:build <scratch space>:104:1: note: expanded from macro '_' |
1569 | | :info:build _polling |
1570 | | :info:build ^ |
1571 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
1572 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
1573 | | :info:build ^ |
1574 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
1575 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
1576 | | :info:build ^ |
1577 | | :info:build In file included from scaffold_graph.cpp:14: |
1578 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
1579 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_lookahead' [-Wunused-variable] |
1580 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
1581 | | :info:build ^ |
1582 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:99:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
1583 | | :info:build BOOST_BGL_ONE_PARAM_CREF(lookahead, lookahead) \ |
1584 | | :info:build ^ |
1585 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
1586 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
1587 | | :info:build ^ |
1588 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
1589 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
1590 | | :info:build ^ |
1591 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
1592 | | :info:build <scratch space>:108:1: note: expanded from macro '_' |
1593 | | :info:build _lookahead |
1594 | | :info:build ^ |
1595 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
1596 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
1597 | | :info:build ^ |
1598 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
1599 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
1600 | | :info:build ^ |
1601 | | :info:build In file included from scaffold_graph.cpp:14: |
1602 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
1603 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_in_parallel' [-Wunused-variable] |
1604 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
1605 | | :info:build ^ |
1606 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:100:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
1607 | | :info:build BOOST_BGL_ONE_PARAM_CREF(in_parallel, in_parallel) \ |
1608 | | :info:build ^ |
1609 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
1610 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
1611 | | :info:build ^ |
1612 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
1613 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
1614 | | :info:build ^ |
1615 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
1616 | | :info:build <scratch space>:112:1: note: expanded from macro '_' |
1617 | | :info:build _in_parallel |
1618 | | :info:build ^ |
1619 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
1620 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
1621 | | :info:build ^ |
1622 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
1623 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
1624 | | :info:build ^ |
1625 | | :info:build In file included from scaffold_graph.cpp:14: |
1626 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
1627 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_displacement_map' [-Wunused-variable] |
1628 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
1629 | | :info:build ^ |
1630 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:101:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
1631 | | :info:build BOOST_BGL_ONE_PARAM_CREF(displacement_map, vertex_displacement) \ |
1632 | | :info:build ^ |
1633 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
1634 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
1635 | | :info:build ^ |
1636 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
1637 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
1638 | | :info:build ^ |
1639 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
1640 | | :info:build <scratch space>:116:1: note: expanded from macro '_' |
1641 | | :info:build _displacement_map |
1642 | | :info:build ^ |
1643 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
1644 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
1645 | | :info:build ^ |
1646 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
1647 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
1648 | | :info:build ^ |
1649 | | :info:build In file included from scaffold_graph.cpp:14: |
1650 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
1651 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_attractive_force' [-Wunused-variable] |
1652 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
1653 | | :info:build ^ |
1654 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:102:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
1655 | | :info:build BOOST_BGL_ONE_PARAM_CREF(attractive_force, attractive_force) \ |
1656 | | :info:build ^ |
1657 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
1658 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
1659 | | :info:build ^ |
1660 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
1661 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
1662 | | :info:build ^ |
1663 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
1664 | | :info:build <scratch space>:120:1: note: expanded from macro '_' |
1665 | | :info:build _attractive_force |
1666 | | :info:build ^ |
1667 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
1668 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
1669 | | :info:build ^ |
1670 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
1671 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
1672 | | :info:build ^ |
1673 | | :info:build In file included from scaffold_graph.cpp:14: |
1674 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
1675 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_repulsive_force' [-Wunused-variable] |
1676 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
1677 | | :info:build ^ |
1678 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:103:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
1679 | | :info:build BOOST_BGL_ONE_PARAM_CREF(repulsive_force, repulsive_force) \ |
1680 | | :info:build ^ |
1681 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
1682 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
1683 | | :info:build ^ |
1684 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
1685 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
1686 | | :info:build ^ |
1687 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
1688 | | :info:build <scratch space>:124:1: note: expanded from macro '_' |
1689 | | :info:build _repulsive_force |
1690 | | :info:build ^ |
1691 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
1692 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
1693 | | :info:build ^ |
1694 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
1695 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
1696 | | :info:build ^ |
1697 | | :info:build In file included from scaffold_graph.cpp:14: |
1698 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
1699 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_force_pairs' [-Wunused-variable] |
1700 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
1701 | | :info:build ^ |
1702 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:104:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
1703 | | :info:build BOOST_BGL_ONE_PARAM_CREF(force_pairs, force_pairs) \ |
1704 | | :info:build ^ |
1705 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
1706 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
1707 | | :info:build ^ |
1708 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
1709 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
1710 | | :info:build ^ |
1711 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
1712 | | :info:build <scratch space>:128:1: note: expanded from macro '_' |
1713 | | :info:build _force_pairs |
1714 | | :info:build ^ |
1715 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
1716 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
1717 | | :info:build ^ |
1718 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
1719 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
1720 | | :info:build ^ |
1721 | | :info:build In file included from scaffold_graph.cpp:14: |
1722 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
1723 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_cooling' [-Wunused-variable] |
1724 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
1725 | | :info:build ^ |
1726 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:105:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
1727 | | :info:build BOOST_BGL_ONE_PARAM_CREF(cooling, cooling) \ |
1728 | | :info:build ^ |
1729 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
1730 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
1731 | | :info:build ^ |
1732 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
1733 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
1734 | | :info:build ^ |
1735 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
1736 | | :info:build <scratch space>:132:1: note: expanded from macro '_' |
1737 | | :info:build _cooling |
1738 | | :info:build ^ |
1739 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
1740 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
1741 | | :info:build ^ |
1742 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
1743 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
1744 | | :info:build ^ |
1745 | | :info:build In file included from scaffold_graph.cpp:14: |
1746 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
1747 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_iterations' [-Wunused-variable] |
1748 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
1749 | | :info:build ^ |
1750 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:106:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
1751 | | :info:build BOOST_BGL_ONE_PARAM_CREF(iterations, iterations) \ |
1752 | | :info:build ^ |
1753 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
1754 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
1755 | | :info:build ^ |
1756 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
1757 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
1758 | | :info:build ^ |
1759 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
1760 | | :info:build <scratch space>:136:1: note: expanded from macro '_' |
1761 | | :info:build _iterations |
1762 | | :info:build ^ |
1763 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
1764 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
1765 | | :info:build ^ |
1766 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
1767 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
1768 | | :info:build ^ |
1769 | | :info:build In file included from scaffold_graph.cpp:14: |
1770 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
1771 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_diameter_range' [-Wunused-variable] |
1772 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
1773 | | :info:build ^ |
1774 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:107:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
1775 | | :info:build BOOST_BGL_ONE_PARAM_CREF(diameter_range, diameter_range) \ |
1776 | | :info:build ^ |
1777 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
1778 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
1779 | | :info:build ^ |
1780 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
1781 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
1782 | | :info:build ^ |
1783 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
1784 | | :info:build <scratch space>:140:1: note: expanded from macro '_' |
1785 | | :info:build _diameter_range |
1786 | | :info:build ^ |
1787 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
1788 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
1789 | | :info:build ^ |
1790 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
1791 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
1792 | | :info:build ^ |
1793 | | :info:build In file included from scaffold_graph.cpp:14: |
1794 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
1795 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_learning_constant_range' [-Wunused-variable] |
1796 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
1797 | | :info:build ^ |
1798 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:108:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
1799 | | :info:build BOOST_BGL_ONE_PARAM_CREF(learning_constant_range, learning_constant_range) \ |
1800 | | :info:build ^ |
1801 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
1802 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
1803 | | :info:build ^ |
1804 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
1805 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
1806 | | :info:build ^ |
1807 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
1808 | | :info:build <scratch space>:144:1: note: expanded from macro '_' |
1809 | | :info:build _learning_constant_range |
1810 | | :info:build ^ |
1811 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
1812 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
1813 | | :info:build ^ |
1814 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
1815 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
1816 | | :info:build ^ |
1817 | | :info:build In file included from scaffold_graph.cpp:14: |
1818 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
1819 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_vertices_equivalent' [-Wunused-variable] |
1820 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
1821 | | :info:build ^ |
1822 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:109:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
1823 | | :info:build BOOST_BGL_ONE_PARAM_CREF(vertices_equivalent, vertices_equivalent) \ |
1824 | | :info:build ^ |
1825 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
1826 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
1827 | | :info:build ^ |
1828 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
1829 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
1830 | | :info:build ^ |
1831 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
1832 | | :info:build <scratch space>:148:1: note: expanded from macro '_' |
1833 | | :info:build _vertices_equivalent |
1834 | | :info:build ^ |
1835 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
1836 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
1837 | | :info:build ^ |
1838 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
1839 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
1840 | | :info:build ^ |
1841 | | :info:build In file included from scaffold_graph.cpp:14: |
1842 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
1843 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_edges_equivalent' [-Wunused-variable] |
1844 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
1845 | | :info:build ^ |
1846 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:110:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
1847 | | :info:build BOOST_BGL_ONE_PARAM_CREF(edges_equivalent, edges_equivalent) \ |
1848 | | :info:build ^ |
1849 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
1850 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
1851 | | :info:build ^ |
1852 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
1853 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
1854 | | :info:build ^ |
1855 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
1856 | | :info:build <scratch space>:152:1: note: expanded from macro '_' |
1857 | | :info:build _edges_equivalent |
1858 | | :info:build ^ |
1859 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
1860 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
1861 | | :info:build ^ |
1862 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
1863 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
1864 | | :info:build ^ |
1865 | | :info:build In file included from scaffold_graph.cpp:14: |
1866 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
1867 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_index_in_heap_map' [-Wunused-variable] |
1868 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
1869 | | :info:build ^ |
1870 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:111:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
1871 | | :info:build BOOST_BGL_ONE_PARAM_CREF(index_in_heap_map, index_in_heap_map) \ |
1872 | | :info:build ^ |
1873 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:334:45: note: expanded from macro 'BOOST_BGL_ONE_PARAM_CREF' |
1874 | | :info:build #define BOOST_BGL_ONE_PARAM_CREF(name, key) BOOST_PARAMETER_NAME(name) |
1875 | | :info:build ^ |
1876 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
1877 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
1878 | | :info:build ^ |
1879 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
1880 | | :info:build <scratch space>:156:1: note: expanded from macro '_' |
1881 | | :info:build _index_in_heap_map |
1882 | | :info:build ^ |
1883 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
1884 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
1885 | | :info:build ^ |
1886 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
1887 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
1888 | | :info:build ^ |
1889 | | :info:build In file included from scaffold_graph.cpp:14: |
1890 | | :info:build In file included from /opt/local/include/boost/graph/depth_first_search.hpp:21: |
1891 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:335:7: warning: unused variable '_max_priority_queue' [-Wunused-variable] |
1892 | | :info:build BOOST_BGL_DECLARE_NAMED_PARAMS |
1893 | | :info:build ^ |
1894 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:112:5: note: expanded from macro 'BOOST_BGL_DECLARE_NAMED_PARAMS' |
1895 | | :info:build BOOST_BGL_ONE_PARAM_REF(max_priority_queue, max_priority_queue) |
1896 | | :info:build ^ |
1897 | | :info:build /opt/local/include/boost/graph/named_function_params.hpp:333:44: note: expanded from macro 'BOOST_BGL_ONE_PARAM_REF' |
1898 | | :info:build #define BOOST_BGL_ONE_PARAM_REF(name, key) BOOST_PARAMETER_NAME(name) |
1899 | | :info:build ^ |
1900 | | :info:build /opt/local/include/boost/parameter/name.hpp:139:9: note: expanded from macro 'BOOST_PARAMETER_NAME' |
1901 | | :info:build , BOOST_PARAMETER_SIMPLE_NAME \ |
1902 | | :info:build ^ |
1903 | | :info:build note: (skipping 6 expansions in backtrace; use -fmacro-backtrace-limit=0 to see all) |
1904 | | :info:build <scratch space>:160:1: note: expanded from macro '_' |
1905 | | :info:build _max_priority_queue |
1906 | | :info:build ^ |
1907 | | :info:build /opt/local/include/boost/parameter/name.hpp:110:53: note: expanded from macro 'BOOST_PARAMETER_BASIC_NAME' |
1908 | | :info:build BOOST_PARAMETER_NAME_OBJECT(tag_namespace::tag, name) |
1909 | | :info:build ^ |
1910 | | :info:build /opt/local/include/boost/parameter/name.hpp:86:48: note: expanded from macro 'BOOST_PARAMETER_NAME_OBJECT' |
1911 | | :info:build ::boost::parameter::keyword<tag> const& name \ |
1912 | | :info:build ^ |
1913 | | :info:build 2 warnings and 3 errors generated. |
1914 | | :info:build make[2]: *** [gtf_to_sam.o] Error 1 |
1915 | | :info:build In file included from bundles.cpp:16: |
1916 | | :info:build In file included from ./bundles.h:21: |
1917 | | :info:build In file included from ./gtf_tracking.h:12: |
1918 | | :info:build In file included from ./gff.h:7: |
1919 | | :info:build In file included from ./GFaSeqGet.h:4: |
1920 | | :info:build ./GList.hh:507:4: error: use of undeclared identifier 'idxInsert' |
1921 | | :info:build idxInsert(result, *item); |
1922 | | :info:build ^ |
1923 | | :info:build this-> |
1924 | | :info:build ./GList.hh:107:33: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
1925 | | :info:build int Add(OBJ& item) { return Add(&item); } //both will CREATE a new OBJ and COPY to it |
1926 | | :info:build ^ |
1927 | | :info:build ./gtf_tracking.h:314:12: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
1928 | | :info:build uexons.Add(seg); |
1929 | | :info:build ^ |
1930 | | :info:build ./GList.hh:52:10: note: must qualify identifier to find this declaration in dependent base class |
1931 | | :info:build void idxInsert(int idx, OBJ& item); |
1932 | | :info:build ^ |
1933 | | :info:build ./GList.hh:772:5: error: use of undeclared identifier 'setCapacity' |
1934 | | :info:build setCapacity(this->fCapacity+list.fCount); |
1935 | | :info:build ^ |
1936 | | :info:build this-> |
1937 | | :info:build ./gtf_tracking.h:650:10: note: in instantiation of member function 'GList<GffObj>::Add' requested here |
1938 | | :info:build qmrnas.Add(loc.mrnas); |
1939 | | :info:build ^ |
1940 | | :info:build ./GList.hh:171:10: note: must qualify identifier to find this declaration in dependent base class |
1941 | | :info:build void setCapacity(int NewCapacity); |
1942 | | :info:build ^ |
1943 | | :info:build ./GList.hh:537:5: error: use of undeclared identifier 'setCapacity' |
1944 | | :info:build setCapacity(this->fCapacity+list.fCount); |
1945 | | :info:build ^ |
1946 | | :info:build this-> |
1947 | | :info:build ./gtf_tracking.h:653:11: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
1948 | | :info:build qmexons.Add(loc.mexons); |
1949 | | :info:build ^ |
1950 | | :info:build ./GList.hh:76:10: note: must qualify identifier to find this declaration in dependent base class |
1951 | | :info:build void setCapacity(int NewCapacity); |
1952 | | :info:build ^ |
1953 | | :info:build In file included from differential.cpp:15: |
1954 | | :info:build ./differential.h:176:50: warning: unused variable 's2' [-Wunused-variable] |
1955 | | :info:build const vector<shared_ptr<Scaffold> >& s2 = bundles[i-1]->ref_scaffolds(); |
1956 | | :info:build ^ |
1957 | | :info:build assemble.cpp:188:21: warning: unused variable 'a_for_b' [-Wunused-variable] |
1958 | | :info:build ReachGraph::ANode a_for_b = b_to_a[b_id]; |
1959 | | :info:build ^ |
1960 | | :info:build assemble.cpp:123:17: warning: unused variable 'hits_for_node' [-Wunused-variable] |
1961 | | :info:build HitsForNodeMap hits_for_node = get(vertex_name, dag); |
1962 | | :info:build ^ |
1963 | | :info:build assemble.cpp:262:21: warning: unused variable 'a_for_b' [-Wunused-variable] |
1964 | | :info:build ReachGraph::ANode a_for_b = bp.nodeFromANodeId(a_id_for_b); |
1965 | | :info:build ^ |
1966 | | :info:build In file included from graph_optimize.cpp:13: |
1967 | | :info:build In file included from ./graph_optimize.h:18: |
1968 | | :info:build In file included from ./scaffold_graph.h:14: |
1969 | | :info:build In file included from /opt/local/include/boost/graph/adjacency_list.hpp:45: |
1970 | | :info:build In file included from /opt/local/include/boost/graph/named_graph.hpp:17: |
1971 | | :info:build /opt/local/include/boost/multi_index/hashed_index.hpp:1254:10: error: no member named 'BOOST_FOREACH' in namespace 'boost' |
1972 | | :info:build boost::foreach::tag) |
1973 | | :info:build ~~~~~~~^ |
1974 | | :info:build ./common.h:26:25: note: expanded from macro 'foreach' |
1975 | | :info:build #define foreach BOOST_FOREACH |
1976 | | :info:build ^ |
1977 | | :info:build ./GList.hh:507:4: error: use of undeclared identifier 'idxInsert' |
1978 | | :info:build idxInsert(result, *item); |
1979 | | :info:build ^ |
1980 | | :info:build this-> |
1981 | | :info:build ./GList.hh:107:33: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
1982 | | :info:build int Add(OBJ& item) { return Add(&item); } //both will CREATE a new OBJ and COPY to it |
1983 | | :info:build ^ |
1984 | | :info:build ./gtf_tracking.h:314:12: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
1985 | | :info:build uexons.Add(seg); |
1986 | | :info:build ^ |
1987 | | :info:build ./GList.hh:52:10: note: must qualify identifier to find this declaration in dependent base class |
1988 | | :info:build void idxInsert(int idx, OBJ& item); |
1989 | | :info:build ^ |
1990 | | :info:build ./GList.hh:772:5: error: use of undeclared identifier 'setCapacity' |
1991 | | :info:build setCapacity(this->fCapacity+list.fCount); |
1992 | | :info:build ^ |
1993 | | :info:build this-> |
1994 | | :info:build ./gtf_tracking.h:650:10: note: in instantiation of member function 'GList<GffObj>::Add' requested here |
1995 | | :info:build qmrnas.Add(loc.mrnas); |
1996 | | :info:build ^ |
1997 | | :info:build ./GList.hh:171:10: note: must qualify identifier to find this declaration in dependent base class |
1998 | | :info:build void setCapacity(int NewCapacity); |
1999 | | :info:build ^ |
2000 | | :info:build ./GList.hh:537:5: error: use of undeclared identifier 'setCapacity' |
2001 | | :info:build setCapacity(this->fCapacity+list.fCount); |
2002 | | :info:build ^ |
2003 | | :info:build this-> |
2004 | | :info:build ./gtf_tracking.h:653:11: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
2005 | | :info:build qmexons.Add(loc.mexons); |
2006 | | :info:build ^ |
2007 | | :info:build ./GList.hh:76:10: note: must qualify identifier to find this declaration in dependent base class |
2008 | | :info:build void setCapacity(int NewCapacity); |
2009 | | :info:build ^ |
2010 | | :info:build ./GList.hh:507:4: error: use of undeclared identifier 'idxInsert' |
2011 | | :info:build idxInsert(result, *item); |
2012 | | :info:build ^ |
2013 | | :info:build this-> |
2014 | | :info:build ./GList.hh:107:33: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
2015 | | :info:build int Add(OBJ& item) { return Add(&item); } //both will CREATE a new OBJ and COPY to it |
2016 | | :info:build ^ |
2017 | | :info:build ./gtf_tracking.h:314:12: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
2018 | | :info:build uexons.Add(seg); |
2019 | | :info:build ^ |
2020 | | :info:build ./GList.hh:52:10: note: must qualify identifier to find this declaration in dependent base class |
2021 | | :info:build void idxInsert(int idx, OBJ& item); |
2022 | | :info:build ^ |
2023 | | :info:build ./GList.hh:772:5: error: use of undeclared identifier 'setCapacity' |
2024 | | :info:build setCapacity(this->fCapacity+list.fCount); |
2025 | | :info:build ^ |
2026 | | :info:build this-> |
2027 | | :info:build ./gtf_tracking.h:650:10: note: in instantiation of member function 'GList<GffObj>::Add' requested here |
2028 | | :info:build qmrnas.Add(loc.mrnas); |
2029 | | :info:build ^ |
2030 | | :info:build ./GList.hh:171:10: note: must qualify identifier to find this declaration in dependent base class |
2031 | | :info:build void setCapacity(int NewCapacity); |
2032 | | :info:build ^ |
2033 | | :info:build ./GList.hh:537:5: error: use of undeclared identifier 'setCapacity' |
2034 | | :info:build setCapacity(this->fCapacity+list.fCount); |
2035 | | :info:build ^ |
2036 | | :info:build this-> |
2037 | | :info:build ./gtf_tracking.h:653:11: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
2038 | | :info:build qmexons.Add(loc.mexons); |
2039 | | :info:build ^ |
2040 | | :info:build ./GList.hh:76:10: note: must qualify identifier to find this declaration in dependent base class |
2041 | | :info:build void setCapacity(int NewCapacity); |
2042 | | :info:build ^ |
2043 | | :info:build ./GList.hh:507:4: error: use of undeclared identifier 'idxInsert' |
2044 | | :info:build idxInsert(result, *item); |
2045 | | :info:build ^ |
2046 | | :info:build this-> |
2047 | | :info:build ./GList.hh:107:33: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
2048 | | :info:build int Add(OBJ& item) { return Add(&item); } //both will CREATE a new OBJ and COPY to it |
2049 | | :info:build ^ |
2050 | | :info:build ./gtf_tracking.h:314:12: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
2051 | | :info:build uexons.Add(seg); |
2052 | | :info:build ^ |
2053 | | :info:build ./GList.hh:52:10: note: must qualify identifier to find this declaration in dependent base class |
2054 | | :info:build void idxInsert(int idx, OBJ& item); |
2055 | | :info:build ^ |
2056 | | :info:build ./GList.hh:772:5: error: use of undeclared identifier 'setCapacity' |
2057 | | :info:build setCapacity(this->fCapacity+list.fCount); |
2058 | | :info:build ^ |
2059 | | :info:build this-> |
2060 | | :info:build ./gtf_tracking.h:650:10: note: in instantiation of member function 'GList<GffObj>::Add' requested here |
2061 | | :info:build qmrnas.Add(loc.mrnas); |
2062 | | :info:build ^ |
2063 | | :info:build ./GList.hh:171:10: note: must qualify identifier to find this declaration in dependent base class |
2064 | | :info:build void setCapacity(int NewCapacity); |
2065 | | :info:build ^ |
2066 | | :info:build ./GList.hh:537:5: error: use of undeclared identifier 'setCapacity' |
2067 | | :info:build setCapacity(this->fCapacity+list.fCount); |
2068 | | :info:build ^ |
2069 | | :info:build this-> |
2070 | | :info:build ./gtf_tracking.h:653:11: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
2071 | | :info:build qmexons.Add(loc.mexons); |
2072 | | :info:build ^ |
2073 | | :info:build ./GList.hh:76:10: note: must qualify identifier to find this declaration in dependent base class |
2074 | | :info:build void setCapacity(int NewCapacity); |
2075 | | :info:build ^ |
2076 | | :info:build ./GList.hh:507:4: error: use of undeclared identifier 'idxInsert' |
2077 | | :info:build idxInsert(result, *item); |
2078 | | :info:build ^ |
2079 | | :info:build this-> |
2080 | | :info:build ./GList.hh:107:33: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
2081 | | :info:build int Add(OBJ& item) { return Add(&item); } //both will CREATE a new OBJ and COPY to it |
2082 | | :info:build ^ |
2083 | | :info:build ./gtf_tracking.h:314:12: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
2084 | | :info:build uexons.Add(seg); |
2085 | | :info:build ^ |
2086 | | :info:build ./GList.hh:52:10: note: must qualify identifier to find this declaration in dependent base class |
2087 | | :info:build void idxInsert(int idx, OBJ& item); |
2088 | | :info:build ^ |
2089 | | :info:build ./GList.hh:772:5: error: use of undeclared identifier 'setCapacity' |
2090 | | :info:build setCapacity(this->fCapacity+list.fCount); |
2091 | | :info:build ^ |
2092 | | :info:build this-> |
2093 | | :info:build ./gtf_tracking.h:650:10: note: in instantiation of member function 'GList<GffObj>::Add' requested here |
2094 | | :info:build qmrnas.Add(loc.mrnas); |
2095 | | :info:build ^ |
2096 | | :info:build ./GList.hh:171:10: note: must qualify identifier to find this declaration in dependent base class |
2097 | | :info:build void setCapacity(int NewCapacity); |
2098 | | :info:build ^ |
2099 | | :info:build ./GList.hh:537:5: error: use of undeclared identifier 'setCapacity' |
2100 | | :info:build setCapacity(this->fCapacity+list.fCount); |
2101 | | :info:build ^ |
2102 | | :info:build this-> |
2103 | | :info:build ./gtf_tracking.h:653:11: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
2104 | | :info:build qmexons.Add(loc.mexons); |
2105 | | :info:build ^ |
2106 | | :info:build ./GList.hh:76:10: note: must qualify identifier to find this declaration in dependent base class |
2107 | | :info:build void setCapacity(int NewCapacity); |
2108 | | :info:build ^ |
2109 | | :info:build 3 warnings and 3 errors generated. |
2110 | | :info:build In file included from cuffdiff.cpp:33: |
2111 | | :info:build In file included from /opt/local/include/boost/graph/adjacency_list.hpp:45: |
2112 | | :info:build In file included from /opt/local/include/boost/graph/named_graph.hpp:17: |
2113 | | :info:build /opt/local/include/boost/multi_index/hashed_index.hpp:1254:10: error: no member named 'BOOST_FOREACH' in namespace 'boost' |
2114 | | :info:build boost::foreach::tag) |
2115 | | :info:build ~~~~~~~^ |
2116 | | :info:build ./common.h:26:25: note: expanded from macro 'foreach' |
2117 | | :info:build #define foreach BOOST_FOREACH |
2118 | | :info:build ^ |
2119 | | :info:build make[2]: *** [bundles.o] Error 1 |
2120 | | :info:build 2 warnings and 3 errors generated. |
2121 | | :info:build make[2]: *** [filters.o] Error 1 |
2122 | | :info:build 2 warnings and 3 errors generated. |
2123 | | :info:build 2 warnings and 3 errors generated. |
2124 | | :info:build 2 warnings and 3 errors generated. |
2125 | | :info:build make[2]: *** [biascorrection.o] Error 1 |
2126 | | :info:build make[2]: *** [clustering.o] Error 1 |
2127 | | :info:build make[2]: *** [abundances.o] Error 1 |
2128 | | :info:build In file included from cufflinks.cpp:25: |
2129 | | :info:build In file included from ./clustering.h:38: |
2130 | | :info:build In file included from ./abundances.h:21: |
2131 | | :info:build ./scaffolds.h:247:34: warning: unused variable 'op' [-Wunused-variable] |
2132 | | :info:build foreach(AugmentedCuffOp& op, aug_ops) |
2133 | | :info:build ^ |
2134 | | :info:build /opt/local/include/boost/foreach.hpp:1108:14: note: expanded from macro 'BOOST_FOREACH' |
2135 | | :info:build for (VAR = BOOST_FOREACH_DEREF(COL); !BOOST_FOREACH_ID(_foreach_continue); BOOST_FOREACH_ID(_foreach_continue) = true) |
2136 | | :info:build ^ |
2137 | | :info:build differential.cpp:632:8: warning: unused variable 'multi_transcript_locus' [-Wunused-variable] |
2138 | | :info:build bool multi_transcript_locus = samples[i]->transcripts.abundances().size() > 1; |
2139 | | :info:build ^ |
2140 | | :info:build In file included from cufflinks.cpp:25: |
2141 | | :info:build In file included from ./clustering.h:38: |
2142 | | :info:build In file included from ./abundances.h:22: |
2143 | | :info:build In file included from ./bundles.h:21: |
2144 | | :info:build In file included from ./gtf_tracking.h:12: |
2145 | | :info:build In file included from ./gff.h:7: |
2146 | | :info:build In file included from ./GFaSeqGet.h:4: |
2147 | | :info:build ./GList.hh:972:6: warning: unused variable 'result' [-Wunused-variable] |
2148 | | :info:build int result=-1; |
2149 | | :info:build ^ |
2150 | | :info:build 1 warning generated. |
2151 | | :info:build In file included from cuffdiff.cpp:42: |
2152 | | :info:build ./differential.h:176:50: warning: unused variable 's2' [-Wunused-variable] |
2153 | | :info:build const vector<shared_ptr<Scaffold> >& s2 = bundles[i-1]->ref_scaffolds(); |
2154 | | :info:build ^ |
2155 | | :info:build cuffdiff.cpp:805:35: warning: unused variable 's2' [-Wunused-variable] |
2156 | | :info:build const AbundanceGroup& s2 = prev.transcripts; |
2157 | | :info:build ^ |
2158 | | :info:build In file included from assemble.cpp:48: |
2159 | | :info:build In file included from ./assemble.h:26: |
2160 | | :info:build In file included from ./bundles.h:21: |
2161 | | :info:build In file included from ./gtf_tracking.h:12: |
2162 | | :info:build In file included from ./gff.h:7: |
2163 | | :info:build In file included from ./GFaSeqGet.h:4: |
2164 | | :info:build ./GList.hh:507:4: error: use of undeclared identifier 'idxInsert' |
2165 | | :info:build idxInsert(result, *item); |
2166 | | :info:build ^ |
2167 | | :info:build this-> |
2168 | | :info:build ./GList.hh:107:33: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
2169 | | :info:build int Add(OBJ& item) { return Add(&item); } //both will CREATE a new OBJ and COPY to it |
2170 | | :info:build ^ |
2171 | | :info:build ./gtf_tracking.h:314:12: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
2172 | | :info:build uexons.Add(seg); |
2173 | | :info:build ^ |
2174 | | :info:build ./GList.hh:52:10: note: must qualify identifier to find this declaration in dependent base class |
2175 | | :info:build void idxInsert(int idx, OBJ& item); |
2176 | | :info:build ^ |
2177 | | :info:build ./GList.hh:772:5: error: use of undeclared identifier 'setCapacity' |
2178 | | :info:build setCapacity(this->fCapacity+list.fCount); |
2179 | | :info:build ^ |
2180 | | :info:build this-> |
2181 | | :info:build ./gtf_tracking.h:650:10: note: in instantiation of member function 'GList<GffObj>::Add' requested here |
2182 | | :info:build qmrnas.Add(loc.mrnas); |
2183 | | :info:build ^ |
2184 | | :info:build ./GList.hh:171:10: note: must qualify identifier to find this declaration in dependent base class |
2185 | | :info:build void setCapacity(int NewCapacity); |
2186 | | :info:build ^ |
2187 | | :info:build ./GList.hh:537:5: error: use of undeclared identifier 'setCapacity' |
2188 | | :info:build setCapacity(this->fCapacity+list.fCount); |
2189 | | :info:build ^ |
2190 | | :info:build this-> |
2191 | | :info:build ./gtf_tracking.h:653:11: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
2192 | | :info:build qmexons.Add(loc.mexons); |
2193 | | :info:build ^ |
2194 | | :info:build ./GList.hh:76:10: note: must qualify identifier to find this declaration in dependent base class |
2195 | | :info:build void setCapacity(int NewCapacity); |
2196 | | :info:build ^ |
2197 | | :info:build In file included from differential.cpp:14: |
2198 | | :info:build In file included from ./abundances.h:22: |
2199 | | :info:build In file included from ./bundles.h:21: |
2200 | | :info:build In file included from ./gtf_tracking.h:12: |
2201 | | :info:build In file included from ./gff.h:7: |
2202 | | :info:build In file included from ./GFaSeqGet.h:4: |
2203 | | :info:build ./GList.hh:507:4: error: use of undeclared identifier 'idxInsert' |
2204 | | :info:build idxInsert(result, *item); |
2205 | | :info:build ^ |
2206 | | :info:build this-> |
2207 | | :info:build ./GList.hh:107:33: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
2208 | | :info:build int Add(OBJ& item) { return Add(&item); } //both will CREATE a new OBJ and COPY to it |
2209 | | :info:build ^ |
2210 | | :info:build ./gtf_tracking.h:314:12: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
2211 | | :info:build uexons.Add(seg); |
2212 | | :info:build ^ |
2213 | | :info:build ./GList.hh:52:10: note: must qualify identifier to find this declaration in dependent base class |
2214 | | :info:build void idxInsert(int idx, OBJ& item); |
2215 | | :info:build ^ |
2216 | | :info:build ./GList.hh:772:5: error: use of undeclared identifier 'setCapacity' |
2217 | | :info:build setCapacity(this->fCapacity+list.fCount); |
2218 | | :info:build ^ |
2219 | | :info:build this-> |
2220 | | :info:build ./gtf_tracking.h:650:10: note: in instantiation of member function 'GList<GffObj>::Add' requested here |
2221 | | :info:build qmrnas.Add(loc.mrnas); |
2222 | | :info:build ^ |
2223 | | :info:build ./GList.hh:171:10: note: must qualify identifier to find this declaration in dependent base class |
2224 | | :info:build void setCapacity(int NewCapacity); |
2225 | | :info:build ^ |
2226 | | :info:build ./GList.hh:537:5: error: use of undeclared identifier 'setCapacity' |
2227 | | :info:build setCapacity(this->fCapacity+list.fCount); |
2228 | | :info:build ^ |
2229 | | :info:build this-> |
2230 | | :info:build ./gtf_tracking.h:653:11: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
2231 | | :info:build qmexons.Add(loc.mexons); |
2232 | | :info:build ^ |
2233 | | :info:build ./GList.hh:76:10: note: must qualify identifier to find this declaration in dependent base class |
2234 | | :info:build void setCapacity(int NewCapacity); |
2235 | | :info:build ^ |
2236 | | :info:build In file included from assemble.cpp:19: |
2237 | | :info:build In file included from ./lemon/topology.h:22: |
2238 | | :info:build In file included from ./lemon/dfs.h:26: |
2239 | | :info:build In file included from ./lemon/list_graph.h:26: |
2240 | | :info:build ./lemon/bits/base_extender.h:362:11: error: use of undeclared identifier 'aNode' |
2241 | | :info:build return aNode(edge); |
2242 | | :info:build ^ |
2243 | | :info:build this-> |
2244 | | :info:build assemble.cpp:258:28: note: in instantiation of member function 'lemon::BidirBpUGraphExtender<lemon::SmartBpUGraphBase>::source' requested here |
2245 | | :info:build ReachGraph::ANode a = bp.source(i); |
2246 | | :info:build ^ |
2247 | | :info:build ./lemon/smart_graph.h:912:8: note: must qualify identifier to find this declaration in dependent base class |
2248 | | :info:build Node aNode(const UEdge& edge) const { |
2249 | | :info:build ^ |
2250 | | :info:build ./lemon/smart_graph.h:919:15: note: must qualify identifier to find this declaration in dependent base class |
2251 | | :info:build static bool aNode(const Node& node) { |
2252 | | :info:build ^ |
2253 | | :info:build In file included from assemble.cpp:19: |
2254 | | :info:build In file included from ./lemon/topology.h:22: |
2255 | | :info:build In file included from ./lemon/dfs.h:26: |
2256 | | :info:build In file included from ./lemon/list_graph.h:26: |
2257 | | :info:build ./lemon/bits/base_extender.h:365:11: error: use of undeclared identifier 'bNode' |
2258 | | :info:build return bNode(edge); |
2259 | | :info:build ^ |
2260 | | :info:build this-> |
2261 | | :info:build assemble.cpp:259:28: note: in instantiation of member function 'lemon::BidirBpUGraphExtender<lemon::SmartBpUGraphBase>::target' requested here |
2262 | | :info:build ReachGraph::BNode b = bp.target(i); |
2263 | | :info:build ^ |
2264 | | :info:build ./lemon/smart_graph.h:915:8: note: must qualify identifier to find this declaration in dependent base class |
2265 | | :info:build Node bNode(const UEdge& edge) const { |
2266 | | :info:build ^ |
2267 | | :info:build ./lemon/smart_graph.h:923:15: note: must qualify identifier to find this declaration in dependent base class |
2268 | | :info:build static bool bNode(const Node& node) { |
2269 | | :info:build ^ |
2270 | | :info:build In file included from cuffdiff.cpp:27: |
2271 | | :info:build In file included from ./bundles.h:21: |
2272 | | :info:build In file included from ./gtf_tracking.h:12: |
2273 | | :info:build In file included from ./gff.h:7: |
2274 | | :info:build In file included from ./GFaSeqGet.h:4: |
2275 | | :info:build ./GList.hh:507:4: error: use of undeclared identifier 'idxInsert' |
2276 | | :info:build idxInsert(result, *item); |
2277 | | :info:build ^ |
2278 | | :info:build this-> |
2279 | | :info:build ./GList.hh:107:33: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
2280 | | :info:build int Add(OBJ& item) { return Add(&item); } //both will CREATE a new OBJ and COPY to it |
2281 | | :info:build ^ |
2282 | | :info:build ./gtf_tracking.h:314:12: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
2283 | | :info:build uexons.Add(seg); |
2284 | | :info:build ^ |
2285 | | :info:build ./GList.hh:52:10: note: must qualify identifier to find this declaration in dependent base class |
2286 | | :info:build void idxInsert(int idx, OBJ& item); |
2287 | | :info:build ^ |
2288 | | :info:build ./GList.hh:772:5: error: use of undeclared identifier 'setCapacity' |
2289 | | :info:build setCapacity(this->fCapacity+list.fCount); |
2290 | | :info:build ^ |
2291 | | :info:build this-> |
2292 | | :info:build ./gtf_tracking.h:650:10: note: in instantiation of member function 'GList<GffObj>::Add' requested here |
2293 | | :info:build qmrnas.Add(loc.mrnas); |
2294 | | :info:build ^ |
2295 | | :info:build ./GList.hh:171:10: note: must qualify identifier to find this declaration in dependent base class |
2296 | | :info:build void setCapacity(int NewCapacity); |
2297 | | :info:build ^ |
2298 | | :info:build ./GList.hh:537:5: error: use of undeclared identifier 'setCapacity' |
2299 | | :info:build setCapacity(this->fCapacity+list.fCount); |
2300 | | :info:build ^ |
2301 | | :info:build this-> |
2302 | | :info:build ./gtf_tracking.h:653:11: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
2303 | | :info:build qmexons.Add(loc.mexons); |
2304 | | :info:build ^ |
2305 | | :info:build ./GList.hh:76:10: note: must qualify identifier to find this declaration in dependent base class |
2306 | | :info:build void setCapacity(int NewCapacity); |
2307 | | :info:build ^ |
2308 | | :info:build 3 warnings generated. |
2309 | | :info:build graph_optimize.cpp:281:30: warning: unused variable 'e' [-Wunused-variable] |
2310 | | :info:build ContainmentGraph::UEdge e = containment.addEdge(nj.first, |
2311 | | :info:build ^ |
2312 | | :info:build ./GList.hh:507:4: error: use of undeclared identifier 'idxInsert' |
2313 | | :info:build idxInsert(result, *item); |
2314 | | :info:build ^ |
2315 | | :info:build this-> |
2316 | | :info:build ./GList.hh:107:33: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
2317 | | :info:build int Add(OBJ& item) { return Add(&item); } //both will CREATE a new OBJ and COPY to it |
2318 | | :info:build ^ |
2319 | | :info:build ./gtf_tracking.h:314:12: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
2320 | | :info:build uexons.Add(seg); |
2321 | | :info:build ^ |
2322 | | :info:build ./GList.hh:52:10: note: must qualify identifier to find this declaration in dependent base class |
2323 | | :info:build void idxInsert(int idx, OBJ& item); |
2324 | | :info:build ^ |
2325 | | :info:build ./GList.hh:772:5: error: use of undeclared identifier 'setCapacity' |
2326 | | :info:build setCapacity(this->fCapacity+list.fCount); |
2327 | | :info:build ^ |
2328 | | :info:build this-> |
2329 | | :info:build ./gtf_tracking.h:650:10: note: in instantiation of member function 'GList<GffObj>::Add' requested here |
2330 | | :info:build qmrnas.Add(loc.mrnas); |
2331 | | :info:build ^ |
2332 | | :info:build ./GList.hh:171:10: note: must qualify identifier to find this declaration in dependent base class |
2333 | | :info:build void setCapacity(int NewCapacity); |
2334 | | :info:build ^ |
2335 | | :info:build ./GList.hh:537:5: error: use of undeclared identifier 'setCapacity' |
2336 | | :info:build setCapacity(this->fCapacity+list.fCount); |
2337 | | :info:build ^ |
2338 | | :info:build this-> |
2339 | | :info:build ./gtf_tracking.h:653:11: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
2340 | | :info:build qmexons.Add(loc.mexons); |
2341 | | :info:build ^ |
2342 | | :info:build ./GList.hh:76:10: note: must qualify identifier to find this declaration in dependent base class |
2343 | | :info:build void setCapacity(int NewCapacity); |
2344 | | :info:build ^ |
2345 | | :info:build 4 warnings and 4 errors generated. |
2346 | | :info:build make[2]: *** [differential.o] Error 1 |
2347 | | :info:build 5 warnings and 5 errors generated. |
2348 | | :info:build 4 warnings and 4 errors generated. |
2349 | | :info:build make[2]: *** [assemble.o] Error 1 |
2350 | | :info:build In file included from graph_optimize.cpp:13: |
2351 | | :info:build In file included from ./graph_optimize.h:17: |
2352 | | :info:build In file included from ./bundles.h:21: |
2353 | | :info:build In file included from ./gtf_tracking.h:12: |
2354 | | :info:build In file included from ./gff.h:7: |
2355 | | :info:build In file included from ./GFaSeqGet.h:4: |
2356 | | :info:build ./GList.hh:507:4: error: use of undeclared identifier 'idxInsert' |
2357 | | :info:build idxInsert(result, *item); |
2358 | | :info:build ^ |
2359 | | :info:build this-> |
2360 | | :info:build ./GList.hh:107:33: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
2361 | | :info:build int Add(OBJ& item) { return Add(&item); } //both will CREATE a new OBJ and COPY to it |
2362 | | :info:build ^ |
2363 | | :info:build ./gtf_tracking.h:314:12: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
2364 | | :info:build uexons.Add(seg); |
2365 | | :info:build ^ |
2366 | | :info:build ./GList.hh:52:10: note: must qualify identifier to find this declaration in dependent base class |
2367 | | :info:build void idxInsert(int idx, OBJ& item); |
2368 | | :info:build ^ |
2369 | | :info:build make[2]: *** [cuffdiff.o] Error 1 |
2370 | | :info:build ./GList.hh:772:5: error: use of undeclared identifier 'setCapacity' |
2371 | | :info:build setCapacity(this->fCapacity+list.fCount); |
2372 | | :info:build ^ |
2373 | | :info:build this-> |
2374 | | :info:build ./gtf_tracking.h:650:10: note: in instantiation of member function 'GList<GffObj>::Add' requested here |
2375 | | :info:build qmrnas.Add(loc.mrnas); |
2376 | | :info:build ^ |
2377 | | :info:build ./GList.hh:171:10: note: must qualify identifier to find this declaration in dependent base class |
2378 | | :info:build void setCapacity(int NewCapacity); |
2379 | | :info:build ^ |
2380 | | :info:build ./GList.hh:537:5: error: use of undeclared identifier 'setCapacity' |
2381 | | :info:build setCapacity(this->fCapacity+list.fCount); |
2382 | | :info:build ^ |
2383 | | :info:build this-> |
2384 | | :info:build ./gtf_tracking.h:653:11: note: in instantiation of member function 'GArray<GSeg>::Add' requested here |
2385 | | :info:build qmexons.Add(loc.mexons); |
2386 | | :info:build ^ |
2387 | | :info:build ./GList.hh:76:10: note: must qualify identifier to find this declaration in dependent base class |
2388 | | :info:build void setCapacity(int NewCapacity); |
2389 | | :info:build ^ |
2390 | | :info:build 48 warnings generated. |
2391 | | :info:build 2 warnings and 4 errors generated. |
2392 | | :info:build make[2]: *** [cufflinks.o] Error 1 |
2393 | | :info:build In file included from graph_optimize.cpp:16: |
2394 | | :info:build In file included from ./lemon/topology.h:22: |
2395 | | :info:build In file included from ./lemon/dfs.h:26: |
2396 | | :info:build In file included from ./lemon/list_graph.h:26: |
2397 | | :info:build ./lemon/bits/base_extender.h:362:11: error: use of undeclared identifier 'aNode' |
2398 | | :info:build return aNode(edge); |
2399 | | :info:build ^ |
2400 | | :info:build this-> |
2401 | | :info:build ./matching_merge.h:68:41: note: in instantiation of member function 'lemon::BidirBpUGraphExtender<lemon::SmartBpUGraphBase>::source' requested here |
2402 | | :info:build ReachGraph::ANode a_match_to_b = bp.source(matched_b_nodes[b]); |
2403 | | :info:build ^ |
2404 | | :info:build ./matching_merge.h:87:5: note: in instantiation of function template specialization 'make_chains_from_matching<lemon::MaxBipartiteMatching<lemon::SmartBpUGraph> >' requested here |
2405 | | :info:build make_chains_from_matching(bp_graph, matcher, chains); |
2406 | | :info:build ^ |
2407 | | :info:build graph_optimize.cpp:304:9: note: in instantiation of function template specialization 'merge_from_matching<lemon::MaxBipartiteMatching<lemon::SmartBpUGraph> >' requested here |
2408 | | :info:build merge_from_matching(containment, matcher, scaffolds); |
2409 | | :info:build ^ |
2410 | | :info:build ./lemon/smart_graph.h:912:8: note: must qualify identifier to find this declaration in dependent base class |
2411 | | :info:build Node aNode(const UEdge& edge) const { |
2412 | | :info:build ^ |
2413 | | :info:build ./lemon/smart_graph.h:919:15: note: must qualify identifier to find this declaration in dependent base class |
2414 | | :info:build static bool aNode(const Node& node) { |
2415 | | :info:build ^ |
2416 | | :info:build 3 warnings and 5 errors generated. |
2417 | | :info:build make[2]: *** [graph_optimize.o] Error 1 |
2418 | | :info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_cufflinks/cufflinks/work/cufflinks-0.9.3/src' |
2419 | | :info:build make[1]: *** [all-recursive] Error 1 |
2420 | | :info:build make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_cufflinks/cufflinks/work/cufflinks-0.9.3' |
2421 | | :info:build make: *** [all] Error 2 |
2422 | | :info:build make: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_cufflinks/cufflinks/work/cufflinks-0.9.3' |
2423 | | :info:build Command failed: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_cufflinks/cufflinks/work/cufflinks-0.9.3" && /usr/bin/make -j24 -w all |
2424 | | :info:build Exit code: 2 |
2425 | | :error:build org.macports.build for port cufflinks returned: command execution failed |
2426 | | :debug:build Error code: CHILDSTATUS 13164 2 |
2427 | | :debug:build Backtrace: command execution failed |
2428 | | while executing |
2429 | | "system -nice 0 $fullcmdstring" |
2430 | | ("eval" body line 1) |
2431 | | invoked from within |
2432 | | "eval system $notty $nice \$fullcmdstring" |
2433 | | invoked from within |
2434 | | "command_exec build" |
2435 | | (procedure "portbuild::build_main" line 8) |
2436 | | invoked from within |
2437 | | "$procedure $targetname" |
2438 | | :info:build Warning: targets not executed for cufflinks: org.macports.activate org.macports.build org.macports.destroot org.macports.install |
2439 | | :notice:build Please see the log file for port cufflinks for details: |
2440 | | /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_cufflinks/cufflinks/main.log |
2441 | | ----- |