Opened 6 years ago
Last modified 2 years ago
#57466 assigned defect
upgrade outdated always rebuilds on hdfeos5 — at Version 2
Reported by: | basmac | Owned by: | tenomoto (Takeshi Enomoto) |
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Priority: | Normal | Milestone: | |
Component: | ports | Version: | 2.5.4 |
Keywords: | Cc: | ||
Port: | hdfeos5 |
Description (last modified by mf2k (Frank Schima))
Hi, building on clean Mojave, I regularly do a port self update and upgrade outdated. Every time I get broken port hdfeos5, even though it has been rebuilt multiple times. It does not affect the build, just annoying here is the example this morning -
bash-3.2# port selfupdate ---> Updating MacPorts base sources using rsync MacPorts base version 2.5.4 installed, MacPorts base version 2.5.4 downloaded. ---> Updating the ports tree ---> MacPorts base is already the latest version The ports tree has been updated. To upgrade your installed ports, you should run port upgrade outdated bash-3.2# port list outdated Warning: The 'list' action only shows the currently available version of each port. To see installed versions, use the 'installed' action. gstreamer1-gst-plugins-base @1.14.4 gnome/gstreamer1-gst-plugins-base libgcrypt @1.8.4 devel/libgcrypt py-matplotlib @3.0.1 python/py-matplotlib SuiteSparse_AMD @2.4.6 math/SuiteSparse SuiteSparse_BTF @1.2.6 math/SuiteSparse SuiteSparse_CAMD @2.4.6 math/SuiteSparse SuiteSparse_CCOLAMD @2.9.6 math/SuiteSparse SuiteSparse_CHOLMOD @3.0.12 math/SuiteSparse SuiteSparse_COLAMD @2.9.6 math/SuiteSparse SuiteSparse_config @5.3.0 math/SuiteSparse SuiteSparse_CSparse @5.3.0 math/SuiteSparse SuiteSparse_CXSparse @3.2.0 math/SuiteSparse SuiteSparse_GraphBLAS @2.0.3 math/SuiteSparse SuiteSparse_KLU @1.3.8 math/SuiteSparse SuiteSparse_LDL @2.2.6 math/SuiteSparse SuiteSparse_Mongoose @2.0.2 math/SuiteSparse SuiteSparse_RBio @2.2.6 math/SuiteSparse SuiteSparse_SPQR @2.0.8 math/SuiteSparse SuiteSparse_UMFPACK @5.7.7 math/SuiteSparse bash-3.2# port upgrade outdated ---> Computing dependencies for gstreamer1-gst-plugins-base ---> Fetching archive for gstreamer1-gst-plugins-base ---> Attempting to fetch gstreamer1-gst-plugins-base-1.14.4_1+ogg+x11.darwin_18.x86_64.tbz2 from http://ywg.ca.packages.macports.org/mirror/macports/packages/gstreamer1-gst-plugins-base ---> Attempting to fetch gstreamer1-gst-plugins-base-1.14.4_1+ogg+x11.darwin_18.x86_64.tbz2.rmd160 from http://ywg.ca.packages.macports.org/mirror/macports/packages/gstreamer1-gst-plugins-base ---> Installing gstreamer1-gst-plugins-base @1.14.4_1+ogg+x11 ---> Cleaning gstreamer1-gst-plugins-base ---> Computing dependencies for gstreamer1-gst-plugins-base ---> Deactivating gstreamer1-gst-plugins-base @1.14.4_0+ogg+x11 ---> Cleaning gstreamer1-gst-plugins-base ---> Activating gstreamer1-gst-plugins-base @1.14.4_1+ogg+x11 ---> Cleaning gstreamer1-gst-plugins-base ---> Computing dependencies for libgcrypt ---> Fetching archive for libgcrypt ---> Attempting to fetch libgcrypt-1.8.4_0.darwin_18.x86_64.tbz2 from http://ywg.ca.packages.macports.org/mirror/macports/packages/libgcrypt ---> Attempting to fetch libgcrypt-1.8.4_0.darwin_18.x86_64.tbz2.rmd160 from http://ywg.ca.packages.macports.org/mirror/macports/packages/libgcrypt ---> Installing libgcrypt @1.8.4_0 ---> Cleaning libgcrypt ---> Computing dependencies for libgcrypt ---> Deactivating libgcrypt @1.8.3_0 ---> Cleaning libgcrypt ---> Activating libgcrypt @1.8.4_0 ---> Cleaning libgcrypt ---> Computing dependencies for py-matplotlib ---> Fetching archive for py-matplotlib ---> Attempting to fetch py-matplotlib-3.0.1_0.darwin_18.noarch.tbz2 from http://ywg.ca.packages.macports.org/mirror/macports/packages/py-matplotlib ---> Attempting to fetch py-matplotlib-3.0.1_0.darwin_18.noarch.tbz2.rmd160 from http://ywg.ca.packages.macports.org/mirror/macports/packages/py-matplotlib ---> Installing py-matplotlib @3.0.1_0 ---> Cleaning py-matplotlib ---> Computing dependencies for py-matplotlib ---> Deactivating py-matplotlib @3.0.0_0 ---> Cleaning py-matplotlib ---> Activating py-matplotlib @3.0.1_0 ---> Cleaning py-matplotlib ---> Fetching archive for SuiteSparse_config ---> Attempting to fetch SuiteSparse_config-5.3.0_0.darwin_18.x86_64.tbz2 from http://ywg.ca.packages.macports.org/mirror/macports/packages/SuiteSparse_config ---> Attempting to fetch SuiteSparse_config-5.3.0_0.darwin_18.x86_64.tbz2.rmd160 from http://ywg.ca.packages.macports.org/mirror/macports/packages/SuiteSparse_config ---> Installing SuiteSparse_config @5.3.0_0 ---> Cleaning SuiteSparse_config ---> Deactivating SuiteSparse_config @7.0_0 ---> Cleaning SuiteSparse_config ---> Activating SuiteSparse_config @5.3.0_0 ---> Cleaning SuiteSparse_config ---> Computing dependencies for SuiteSparse_AMD ---> Fetching archive for SuiteSparse_AMD ---> Attempting to fetch SuiteSparse_AMD-2.4.6_0.darwin_18.x86_64.tbz2 from http://ywg.ca.packages.macports.org/mirror/macports/packages/SuiteSparse_AMD ---> Attempting to fetch SuiteSparse_AMD-2.4.6_0.darwin_18.x86_64.tbz2.rmd160 from http://ywg.ca.packages.macports.org/mirror/macports/packages/SuiteSparse_AMD ---> Installing SuiteSparse_AMD @2.4.6_0 ---> Cleaning SuiteSparse_AMD ---> Computing dependencies for SuiteSparse_AMD ---> Deactivating SuiteSparse_AMD @7.0_0 ---> Cleaning SuiteSparse_AMD ---> Activating SuiteSparse_AMD @2.4.6_0 ---> Cleaning SuiteSparse_AMD ---> Computing dependencies for SuiteSparse_BTF ---> Fetching archive for SuiteSparse_BTF ---> Attempting to fetch SuiteSparse_BTF-1.2.6_0.darwin_18.x86_64.tbz2 from http://ywg.ca.packages.macports.org/mirror/macports/packages/SuiteSparse_BTF ---> Attempting to fetch SuiteSparse_BTF-1.2.6_0.darwin_18.x86_64.tbz2.rmd160 from http://ywg.ca.packages.macports.org/mirror/macports/packages/SuiteSparse_BTF ---> Installing SuiteSparse_BTF @1.2.6_0 ---> Cleaning SuiteSparse_BTF ---> Computing dependencies for SuiteSparse_BTF ---> Deactivating SuiteSparse_BTF @7.0_0 ---> Cleaning SuiteSparse_BTF ---> Activating SuiteSparse_BTF @1.2.6_0 ---> Cleaning SuiteSparse_BTF ---> Computing dependencies for SuiteSparse_CAMD ---> Fetching archive for SuiteSparse_CAMD ---> Attempting to fetch SuiteSparse_CAMD-2.4.6_0.darwin_18.x86_64.tbz2 from http://ywg.ca.packages.macports.org/mirror/macports/packages/SuiteSparse_CAMD ---> Attempting to fetch SuiteSparse_CAMD-2.4.6_0.darwin_18.x86_64.tbz2.rmd160 from http://ywg.ca.packages.macports.org/mirror/macports/packages/SuiteSparse_CAMD ---> Installing SuiteSparse_CAMD @2.4.6_0 ---> Cleaning SuiteSparse_CAMD ---> Computing dependencies for SuiteSparse_CAMD ---> Deactivating SuiteSparse_CAMD @7.0_0 ---> Cleaning SuiteSparse_CAMD ---> Activating SuiteSparse_CAMD @2.4.6_0 ---> Cleaning SuiteSparse_CAMD ---> Computing dependencies for SuiteSparse_CCOLAMD ---> Fetching archive for SuiteSparse_CCOLAMD ---> Attempting to fetch SuiteSparse_CCOLAMD-2.9.6_0.darwin_18.x86_64.tbz2 from http://ywg.ca.packages.macports.org/mirror/macports/packages/SuiteSparse_CCOLAMD ---> Attempting to fetch SuiteSparse_CCOLAMD-2.9.6_0.darwin_18.x86_64.tbz2.rmd160 from http://ywg.ca.packages.macports.org/mirror/macports/packages/SuiteSparse_CCOLAMD ---> Installing SuiteSparse_CCOLAMD @2.9.6_0 ---> Cleaning SuiteSparse_CCOLAMD ---> Computing dependencies for SuiteSparse_CCOLAMD ---> Deactivating SuiteSparse_CCOLAMD @7.0_0 ---> Cleaning SuiteSparse_CCOLAMD ---> Activating SuiteSparse_CCOLAMD @2.9.6_0 ---> Cleaning SuiteSparse_CCOLAMD ---> Computing dependencies for SuiteSparse_COLAMD ---> Fetching archive for SuiteSparse_COLAMD ---> Attempting to fetch SuiteSparse_COLAMD-2.9.6_0.darwin_18.x86_64.tbz2 from http://ywg.ca.packages.macports.org/mirror/macports/packages/SuiteSparse_COLAMD ---> Attempting to fetch SuiteSparse_COLAMD-2.9.6_0.darwin_18.x86_64.tbz2.rmd160 from http://ywg.ca.packages.macports.org/mirror/macports/packages/SuiteSparse_COLAMD ---> Installing SuiteSparse_COLAMD @2.9.6_0 ---> Cleaning SuiteSparse_COLAMD ---> Computing dependencies for SuiteSparse_COLAMD ---> Deactivating SuiteSparse_COLAMD @7.0_0 ---> Cleaning SuiteSparse_COLAMD ---> Activating SuiteSparse_COLAMD @2.9.6_0 ---> Cleaning SuiteSparse_COLAMD ---> Computing dependencies for SuiteSparse_CHOLMOD ---> Fetching archive for SuiteSparse_CHOLMOD ---> Attempting to fetch SuiteSparse_CHOLMOD-3.0.12_0+accelerate.darwin_18.x86_64.tbz2 from http://ywg.ca.packages.macports.org/mirror/macports/packages/SuiteSparse_CHOLMOD ---> Attempting to fetch SuiteSparse_CHOLMOD-3.0.12_0+accelerate.darwin_18.x86_64.tbz2.rmd160 from http://ywg.ca.packages.macports.org/mirror/macports/packages/SuiteSparse_CHOLMOD ---> Installing SuiteSparse_CHOLMOD @3.0.12_0+accelerate ---> Cleaning SuiteSparse_CHOLMOD ---> Computing dependencies for SuiteSparse_CHOLMOD ---> Deactivating SuiteSparse_CHOLMOD @7.0_0+accelerate ---> Cleaning SuiteSparse_CHOLMOD ---> Activating SuiteSparse_CHOLMOD @3.0.12_0+accelerate ---> Cleaning SuiteSparse_CHOLMOD ---> Fetching archive for SuiteSparse_CSparse ---> Attempting to fetch SuiteSparse_CSparse-5.3.0_0.darwin_18.x86_64.tbz2 from http://ywg.ca.packages.macports.org/mirror/macports/packages/SuiteSparse_CSparse ---> Attempting to fetch SuiteSparse_CSparse-5.3.0_0.darwin_18.x86_64.tbz2.rmd160 from http://ywg.ca.packages.macports.org/mirror/macports/packages/SuiteSparse_CSparse ---> Installing SuiteSparse_CSparse @5.3.0_0 ---> Cleaning SuiteSparse_CSparse ---> Deactivating SuiteSparse_CSparse @7.0_0 ---> Cleaning SuiteSparse_CSparse ---> Activating SuiteSparse_CSparse @5.3.0_0 ---> Cleaning SuiteSparse_CSparse ---> Computing dependencies for SuiteSparse_CXSparse ---> Fetching archive for SuiteSparse_CXSparse ---> Attempting to fetch SuiteSparse_CXSparse-3.2.0_0.darwin_18.x86_64.tbz2 from http://ywg.ca.packages.macports.org/mirror/macports/packages/SuiteSparse_CXSparse ---> Attempting to fetch SuiteSparse_CXSparse-3.2.0_0.darwin_18.x86_64.tbz2.rmd160 from http://ywg.ca.packages.macports.org/mirror/macports/packages/SuiteSparse_CXSparse ---> Installing SuiteSparse_CXSparse @3.2.0_0 ---> Cleaning SuiteSparse_CXSparse ---> Computing dependencies for SuiteSparse_CXSparse ---> Deactivating SuiteSparse_CXSparse @7.0_0 ---> Cleaning SuiteSparse_CXSparse ---> Activating SuiteSparse_CXSparse @3.2.0_0 ---> Cleaning SuiteSparse_CXSparse ---> Fetching archive for SuiteSparse_GraphBLAS ---> Attempting to fetch SuiteSparse_GraphBLAS-2.0.3_0.darwin_18.x86_64.tbz2 from http://ywg.ca.packages.macports.org/mirror/macports/packages/SuiteSparse_GraphBLAS ---> Attempting to fetch SuiteSparse_GraphBLAS-2.0.3_0.darwin_18.x86_64.tbz2.rmd160 from http://ywg.ca.packages.macports.org/mirror/macports/packages/SuiteSparse_GraphBLAS ---> Installing SuiteSparse_GraphBLAS @2.0.3_0 ---> Cleaning SuiteSparse_GraphBLAS ---> Deactivating SuiteSparse_GraphBLAS @7.0_0 ---> Cleaning SuiteSparse_GraphBLAS ---> Activating SuiteSparse_GraphBLAS @2.0.3_0 ---> Cleaning SuiteSparse_GraphBLAS ---> Computing dependencies for SuiteSparse_KLU ---> Fetching archive for SuiteSparse_KLU ---> Attempting to fetch SuiteSparse_KLU-1.3.8_0.darwin_18.x86_64.tbz2 from http://ywg.ca.packages.macports.org/mirror/macports/packages/SuiteSparse_KLU ---> Attempting to fetch SuiteSparse_KLU-1.3.8_0.darwin_18.x86_64.tbz2.rmd160 from http://ywg.ca.packages.macports.org/mirror/macports/packages/SuiteSparse_KLU ---> Installing SuiteSparse_KLU @1.3.8_0 ---> Cleaning SuiteSparse_KLU ---> Computing dependencies for SuiteSparse_KLU ---> Deactivating SuiteSparse_KLU @7.0_0 ---> Cleaning SuiteSparse_KLU ---> Activating SuiteSparse_KLU @1.3.8_0 ---> Cleaning SuiteSparse_KLU ---> Computing dependencies for SuiteSparse_LDL ---> Fetching archive for SuiteSparse_LDL ---> Attempting to fetch SuiteSparse_LDL-2.2.6_0.darwin_18.x86_64.tbz2 from http://ywg.ca.packages.macports.org/mirror/macports/packages/SuiteSparse_LDL ---> Attempting to fetch SuiteSparse_LDL-2.2.6_0.darwin_18.x86_64.tbz2.rmd160 from http://ywg.ca.packages.macports.org/mirror/macports/packages/SuiteSparse_LDL ---> Installing SuiteSparse_LDL @2.2.6_0 ---> Cleaning SuiteSparse_LDL ---> Computing dependencies for SuiteSparse_LDL ---> Deactivating SuiteSparse_LDL @7.0_0 ---> Cleaning SuiteSparse_LDL ---> Activating SuiteSparse_LDL @2.2.6_0 ---> Cleaning SuiteSparse_LDL ---> Computing dependencies for SuiteSparse_Mongoose ---> Fetching archive for SuiteSparse_Mongoose ---> Attempting to fetch SuiteSparse_Mongoose-2.0.2_0.darwin_18.x86_64.tbz2 from http://ywg.ca.packages.macports.org/mirror/macports/packages/SuiteSparse_Mongoose ---> Attempting to fetch SuiteSparse_Mongoose-2.0.2_0.darwin_18.x86_64.tbz2.rmd160 from http://ywg.ca.packages.macports.org/mirror/macports/packages/SuiteSparse_Mongoose ---> Installing SuiteSparse_Mongoose @2.0.2_0 ---> Cleaning SuiteSparse_Mongoose ---> Computing dependencies for SuiteSparse_Mongoose ---> Deactivating SuiteSparse_Mongoose @7.0_0 ---> Cleaning SuiteSparse_Mongoose ---> Activating SuiteSparse_Mongoose @2.0.2_0 ---> Cleaning SuiteSparse_Mongoose ---> Computing dependencies for SuiteSparse_RBio ---> Fetching archive for SuiteSparse_RBio ---> Attempting to fetch SuiteSparse_RBio-2.2.6_0.darwin_18.x86_64.tbz2 from http://ywg.ca.packages.macports.org/mirror/macports/packages/SuiteSparse_RBio ---> Attempting to fetch SuiteSparse_RBio-2.2.6_0.darwin_18.x86_64.tbz2.rmd160 from http://ywg.ca.packages.macports.org/mirror/macports/packages/SuiteSparse_RBio ---> Installing SuiteSparse_RBio @2.2.6_0 ---> Cleaning SuiteSparse_RBio ---> Computing dependencies for SuiteSparse_RBio ---> Deactivating SuiteSparse_RBio @7.0_0 ---> Cleaning SuiteSparse_RBio ---> Activating SuiteSparse_RBio @2.2.6_0 ---> Cleaning SuiteSparse_RBio ---> Computing dependencies for SuiteSparse_SPQR ---> Fetching archive for SuiteSparse_SPQR ---> Attempting to fetch SuiteSparse_SPQR-2.0.8_0+accelerate.darwin_18.x86_64.tbz2 from http://ywg.ca.packages.macports.org/mirror/macports/packages/SuiteSparse_SPQR ---> Attempting to fetch SuiteSparse_SPQR-2.0.8_0+accelerate.darwin_18.x86_64.tbz2.rmd160 from http://ywg.ca.packages.macports.org/mirror/macports/packages/SuiteSparse_SPQR ---> Installing SuiteSparse_SPQR @2.0.8_0+accelerate ---> Cleaning SuiteSparse_SPQR ---> Computing dependencies for SuiteSparse_SPQR ---> Deactivating SuiteSparse_SPQR @7.0_0+accelerate ---> Cleaning SuiteSparse_SPQR ---> Activating SuiteSparse_SPQR @2.0.8_0+accelerate ---> Cleaning SuiteSparse_SPQR ---> Computing dependencies for SuiteSparse_UMFPACK ---> Fetching archive for SuiteSparse_UMFPACK ---> Attempting to fetch SuiteSparse_UMFPACK-5.7.7_0+accelerate.darwin_18.x86_64.tbz2 from http://ywg.ca.packages.macports.org/mirror/macports/packages/SuiteSparse_UMFPACK ---> Attempting to fetch SuiteSparse_UMFPACK-5.7.7_0+accelerate.darwin_18.x86_64.tbz2.rmd160 from http://ywg.ca.packages.macports.org/mirror/macports/packages/SuiteSparse_UMFPACK ---> Installing SuiteSparse_UMFPACK @5.7.7_0+accelerate ---> Cleaning SuiteSparse_UMFPACK ---> Computing dependencies for SuiteSparse_UMFPACK ---> Deactivating SuiteSparse_UMFPACK @7.0_0+accelerate ---> Cleaning SuiteSparse_UMFPACK ---> Activating SuiteSparse_UMFPACK @5.7.7_0+accelerate ---> Cleaning SuiteSparse_UMFPACK ---> Scanning binaries for linking errors ---> Found 2 broken files, matching files to ports ---> Found 1 broken port, determining rebuild order You can always run 'port rev-upgrade' again to fix errors. The following ports will be rebuilt: hdfeos5 @1.16 Continue? [Y/n]: y ---> Computing dependencies for hdfeos5 ---> Cleaning hdfeos5 ---> Scanning binaries for linking errors ---> Found 2 broken files, matching files to ports ---> Found 1 broken port, determining rebuild order ---> Rebuilding in order hdfeos5 @1.16 ---> Computing dependencies for hdfeos5 ---> Fetching distfiles for hdfeos5 ---> Attempting to fetch HDF-EOS5.1.16.tar.Z from http://ywg.ca.distfiles.macports.org/mirror/macports/distfiles/hdfeos5 ---> Verifying checksums for hdfeos5 ---> Extracting hdfeos5 ---> Configuring hdfeos5 ---> Building hdfeos5 ---> Staging hdfeos5 into destroot ---> Unable to uninstall hdfeos5 @1.16_0, the following ports depend on it: ---> ncarg @6.5.0_2+accelerate+gcc7 Warning: Uninstall forced. Proceeding despite dependencies. ---> Deactivating hdfeos5 @1.16_0 ---> Cleaning hdfeos5 ---> Uninstalling hdfeos5 @1.16_0 ---> Cleaning hdfeos5 ---> Computing dependencies for hdfeos5 ---> Installing hdfeos5 @1.16_0 ---> Activating hdfeos5 @1.16_0 ---> Cleaning hdfeos5 ---> Scanning binaries for linking errors ---> No broken files found. ---> No broken ports found. bash-3.2# port rev-upgrade ---> Scanning binaries for linking errors ---> No broken files found. ---> No broken ports found. bash-3.2#
Change History (2)
comment:1 Changed 6 years ago by mf2k (Frank Schima)
Keywords: | upgrade hdfeos5 removed |
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Owner: | set to tenomoto |
Status: | new → assigned |
comment:2 Changed 6 years ago by mf2k (Frank Schima)
Description: | modified (diff) |
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