Opened 7 years ago

Closed 7 years ago

#55887 closed defect (duplicate)

openmpi-gcc6 @3.0.0: build failed

Reported by: jrakas Owned by: seanfarley (Sean Farley)
Priority: Normal Milestone:
Component: ports Version: 2.4.2
Keywords: Cc:
Port: openmpi-gcc6

Description (last modified by ryandesign (Ryan Carsten Schmidt))

Hi, I am trying to install port hdf5-18, but when I try to I am redirected to instead install hdf5. This is what I am running:

sudo port install hdf5 +cxx +gcc6 +fortran +openmpi +szip

Then afterwards I get this:

juliarakas:SWMF_2018_02_21$ sudo port install hdf5 +cxx +gcc6 +fortran +openmpi +szip
--->  Computing dependencies for hdf5
The following dependencies will be installed: 
 openmpi-gcc6
 szip
Continue? [Y/n]: y
--->  Building openmpi-gcc6
Error: Failed to build openmpi-gcc6: command execution failed
Error: See /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_openmpi/openmpi-gcc6/main.log for details.
Error: Follow https://guide.macports.org/#project.tickets to report a bug.
Error: Processing of port hdf5 failed

I am not sure what to do/how to install hdf5

Attachments (1)

main.log (284.4 KB) - added by jrakas 7 years ago.
log file

Download all attachments as: .zip

Change History (5)

comment:1 Changed 7 years ago by ryandesign (Ryan Carsten Schmidt)

Description: modified (diff)
Owner: set to seanfarley
Port: openmpi-gcc6 added
Status: newassigned
Summary: Processing of port hdf5 failedopenmpi-gcc6 @3.0.0: build failed

Please sudo port clean openmpi-gcc6 and try again. If it fails again, attach the main.log file.

Changed 7 years ago by jrakas

Attachment: main.log added

log file

comment:2 Changed 7 years ago by jrakas

Unfortunately it did not work. Here is the log file

comment:3 Changed 7 years ago by seanfarley (Sean Farley)

Status: assignedaccepted

Looks like this is fixed in the next release: https://github.com/open-mpi/ompi/issues/4373

comment:4 Changed 7 years ago by seanfarley (Sean Farley)

Resolution: duplicate
Status: acceptedclosed

Actually, I see this is a duplicate of https://trac.macports.org/ticket/54993

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