Opened 4 months ago
Last modified 3 months ago
#70260 new defect
hpddm build failure: Undefined symbols: "_dpstrf_"
Reported by: | barracuda156 | Owned by: | |
---|---|---|---|
Priority: | Normal | Milestone: | |
Component: | ports | Version: | 2.9.3 |
Keywords: | Cc: | MarcusCalhoun-Lopez (Marcus Calhoun-Lopez), catap (Kirill A. Korinsky) | |
Port: | hpddm |
Description
mpicxx-mpich-gcc13 -MT /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_hpddm/hpddm/work/hpddm-2.2.5/lib/libhpddm_fortran.dylib -MMD -MP -MF /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_hpddm/hpddm/work/hpddm-2.2.5/.trash/libhpddm_fortran.Td -Os -arch ppc -D_GLIBCXX_USE_CXX11_ABI=0 -std=c++11 -DHPDDM_NUMBERING='C' -DDMUMPS -DMUMPSSUB -DMU_ARPACK -I./include -I./interface -I/opt/local/include -dynamiclib -install_name /opt/local/lib/libhpddm_fortran.dylib -current_version 2.2.5 -compatibility_version 2 interface/hpddm_fortran.cpp -o /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_hpddm/hpddm/work/hpddm-2.2.5/lib/libhpddm_fortran.dylib -L/opt/local/lib -lmumps_common -lesmumps -lsmumps -ldmumps -lcmumps -lzmumps -lpord -L/opt/local/lib -larpack -L/opt/local/lib -lscalapack -L/opt/local/lib -lvecLibFort mv -f /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_hpddm/hpddm/work/hpddm-2.2.5/.trash/generate_cpp.Td /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_hpddm/hpddm/work/hpddm-2.2.5/.trash/generate_cpp.d || true Undefined symbols: "_dpstrf_", referenced from: __ZN5HPDDM15IterativeMethod4RRQRILb0EdEEvciiPT0_S3_NS_20underlying_type_specIS2_E4typeERiPiPKS6_S3_RKi in ccBSo8Nj.o ld: symbol(s) not found collect2: error: ld returned 1 exit status make: *** [/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_hpddm/hpddm/work/hpddm-2.2.5/lib/libhpddm_fortran.dylib] Error 1 make: *** Waiting for unfinished jobs.... mv -f /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_hpddm/hpddm/work/hpddm-2.2.5/.trash/schwarz_cpp.Td /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_hpddm/hpddm/work/hpddm-2.2.5/.trash/schwarz_cpp.d || true mv -f /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_hpddm/hpddm/work/hpddm-2.2.5/.trash/hpddm_c.Td /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_hpddm/hpddm/work/hpddm-2.2.5/.trash/hpddm_c.d || true Undefined symbols: "_dpstrf_", referenced from: __ZN5HPDDM15IterativeMethod4RRQRILb0EdEEvciiPT0_S3_NS_20underlying_type_specIS2_E4typeERiPiPKS6_S3_RKi in ccV1SGPI.o ld: symbol(s) not found collect2: error: ld returned 1 exit status
Change History (3)
comment:1 follow-ups: 2 3 Changed 3 months ago by ryandesign (Ryan Carsten Schmidt)
comment:2 Changed 3 months ago by barracuda156
Replying to ryandesign:
The build worked on build machines running macOS 10.7–13 but we saw the same error on the 10.6 build machines:
Searching for
dpstrf
I found it is part of BLAS. Maybe the problem is that the build usesBLAS_LIBS="-L/opt/local/lib -lvecLibFort"
and maybe libvecLibFort doesn't have this symbol on 10.6 and earlier.
This sounds very likely.
I will see if this will build against OpenBLAS instead. Thank you for pointing out.
comment:3 Changed 3 months ago by barracuda156
Replying to ryandesign:
This returns me to a need to fix our broken linearalgebra
PG. Currently it forces +accelerate
on older platforms, and my last attempt to sort this out did not quite work out.
Note: See
TracTickets for help on using
tickets.
The build worked on build machines running macOS 10.7–13 but we saw the same error on the 10.6 build machines:
https://build.macports.org/builders/ports-10.6_x86_64-builder/builds/207893/steps/install-port/logs/stdio
Searching for
dpstrf
I found it is part of BLAS. Maybe the problem is that the build usesBLAS_LIBS="-L/opt/local/lib -lvecLibFort"
and maybe libvecLibFort doesn't have this symbol on 10.6 and earlier.